Scientific Name
human gut metagenome
Common Names
human gut microbiota
Bioproject
PRJCA003712
Biosample
SAMC273073
Accession No.
GWHAZBG00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
The Institute of Metagenomics Research, BGI
Contact
Lilan Hao, haolilan@genomics.cn
Sequence author(s)
Zhuye Jie
Released Date
2021-02-28
Assembly Level
Draft genome in contig level
Genome Representation
Full Genome
Assembly method
metaSPAdes v.3.13.0
MetaBAT2 v2.12.1
Sequencing & coverage
BGISEQ-500 30
Download
DNA
Publication(s)
Zhuye Jie, et al. Life History Recorded in the Vagino-cervical Microbiome Along with Multi-omes. Genomics, Proteomics & Bioinformatics. 2022, 20(2): 304-321.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHAZBG00000000 - fe17_X107201701824 Draft genome in contig level 2021-02-28 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 216,818,741
GC content 45.09%
Contig sequence No. 253,239
Maximum contig sequence length (bp) 367,790
Minimum contig sequence length (bp) 200
Average contig sequence length (bp) 856
Contig N50 (bp) 2,259
Contig N90 (bp) 269