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语言/Language
中文
English
human gut metagenome
MGS.igc1473_asm
Scientific Name
human gut metagenome
Common Names
human gut microbiota
Bioproject
PRJCA003712
Biosample
SAMC282902
Accession No.
GWHAYZQ00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
The Institute of Metagenomics Research, BGI
Contact
Lilan Hao, haolilan@genomics.cn
Sequence author(s)
Zhuye Jie
Released Date
2021-02-28
Assembly Level
Draft genome in contig level
Genome Representation
Full Genome
Assembly method
SOAPdenovo v.1.06
GeneMarker v3.0.1
Sequencing & coverage
BGISEQ-500 100
Download
DNA
Publication(s)
Zhuye Jie, et al. Life History Recorded in the Vagino-cervical Microbiome Along with Multi-omes. Genomics, Proteomics & Bioinformatics. 2022, 20(2): 304-321.
History
Assembly Accession
GWH Reannotation Accession
Assembly Name
Assembly Level
Released Date
Download Files
GWHAYZQ00000000
-
MGS.igc1473_asm
Draft genome in contig level
2021-02-28
DNA
GFF
RNA
Protein
GWH
Statistics of Genome Assembly
Genome size (bp)
489,135
GC content
30.75%
Contig sequence No.
546
Maximum contig sequence length (bp)
4,314
Minimum contig sequence length (bp)
201
Average contig sequence length (bp)
896
Contig N50 (bp)
1,077
Contig N90 (bp)
492