Scientific Name
human gut metagenome
Common Names
human gut microbiota
Bioproject
PRJCA003712
Biosample
SAMC282886
Accession No.
GWHAYZA00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
The Institute of Metagenomics Research, BGI
Contact
Lilan Hao, haolilan@genomics.cn
Sequence author(s)
Zhuye Jie
Released Date
2021-02-28
Assembly Level
Draft genome in contig level
Genome Representation
Full Genome
Assembly method
SOAPdenovo v.1.06
GeneMarker v3.0.1
Sequencing & coverage
BGISEQ-500 100
Download
DNA
Publication(s)
Zhuye Jie, et al. Life History Recorded in the Vagino-cervical Microbiome Along with Multi-omes. Genomics, Proteomics & Bioinformatics. 2022, 20(2): 304-321.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHAYZA00000000 - MGS.igc1448_asm Draft genome in contig level 2021-02-28 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 364,749
GC content 46.22%
Contig sequence No. 644
Maximum contig sequence length (bp) 4,524
Minimum contig sequence length (bp) 201
Average contig sequence length (bp) 566
Contig N50 (bp) 618
Contig N90 (bp) 354