Scientific Name
Ophiocordyceps sinensis
Common Names
-
Bioproject
PRJCA001136
Biosample
SAMC049194
Accession No.
GWHAAFH00000000
Submitter Organization
State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences
Contact
Ruihao Shu, shuruihao@ioz.ac.cn
Sequence author(s)
Ruihao Shu
Released Date
2020-06-28
Assembly Level
Draft genome in contig level
Genome Representation
Partial Genome ( Nuclear )
Reference Genome
yes
Assembly method
Canu 1.7
Sequencing & coverage
PacBio 100.0
Download
DNA GFF RNA Protein
Publication(s)
Ruihao Shu, et al. A new high-quality draft genome assembly of the Chinese cordyceps Ophiocordyceps sinensis. Genome Biology and Evolution. 2020.
Assembly Accession Assembly Name Assembly Level Release Date Download Files
GWHAAFH00000000 IOZ07v1.5 Draft genome in contig level 2020-06-28 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 110,880,992
GC content 45.10%
Contig sequence No. 23
Maximum contig sequence length (bp) 23,284,981
Minimum contig sequence length (bp) 1,768
Average contig sequence length (bp) 4,820,913
Contig N50 (bp) 18,163,664
Contig N90 (bp) 3,914,182
Annotation of Whole Genome Assembly
Protein Pesudogene Total
Total 9,962 14 9,976