- Scientific Name
- Diaporthe longicolla
- Common Names
- Phomopsis longicolla
- Bioproject
- PRJCA003995
- Biosample
- SAMC291583
- Accession No.
- GWHASJP00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR239352
- GVM variations of the species
- -
- Submitter Organization
- Department of Plant Protection, Nanjing Agricultural University
- Contact
- Wenwu Ye, yeww@njau.edu.cn
- Sequence author(s)
- Wenwu Ye
- Released Date
- 2020-12-14
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- MECAT v2
- Sequencing & coverage
- PacBio 130.0
Illumina NovaSeq 6000 92.0 - Download
-
DNA
GFF
RNA
Protein
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 63,102,619 |
| GC content | 48.72% |
| Scaffold sequence No. | 87 |
| Maximum scaffold sequence length (bp) | 4,634,751 |
| Minimum scaffold sequence length (bp) | 20,057 |
| Average scaffold sequence length (bp) | 725,317 |
| Scaffold N50 (bp) | 1,502,851 |
| Scaffold N90 (bp) | 351,263 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 17,389 | 17,389 |