- Scientific Name
- Amynthas corticis
- Common Names
- Amynthas divergens, Amynthas heteropodus, Amynthas homosetus
- Bioproject
- PRJCA002308
- Biosample
- SAMC249927
- Accession No.
- GWHAOSM00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Resources and Environmental Sciences, China Agricultural University
- Contact
- Zhenjun Sun, sun108@cau.edu.cn
- Sequence author(s)
- Mingming Kang
- Released Date
- 2020-12-07
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- FALCON version 0.3
- Sequencing & coverage
- PacBio 53.0
- Download
-
DNA
GFF
RNA
Protein
- Publication(s)
- Xing Wang, et al. Amynthas corticis genome reveals molecular mechanisms behind global distribution. Communications Biology. 2021, 4.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAOSM00000000 | - | Amynthas corticis | Draft genome in scaffold level | 2020-09-28 |
DNA
|
| GWHAOSM00000000.1 | - | Amynthas corticis | Draft genome in scaffold level | 2020-12-07 |
DNA
GFF
RNA
Protein
|
Statistics of Genome Assembly
| Genome size (bp) | 1,285,166,759 |
| GC content | 40.44% |
| Scaffold sequence No. | 1,042 |
| Maximum scaffold sequence length (bp) | 55,651,430 |
| Minimum scaffold sequence length (bp) | 5,002 |
| Average scaffold sequence length (bp) | 1,233,365 |
| Scaffold N50 (bp) | 31,950,757 |
| Scaffold N90 (bp) | 21,414,444 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 12,076 | 12,076 |