Genome Warehouse

Scientific Name: Zea mays
Common Names: maize; Zea mays var. japonica
Bioproject: PRJCA000828
Biosample: SAMC036455
Accession No.: GWHAACS00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: 73,140,072 (SNP), 16,129,758 (Indel)
Submitter Organization: Maize Group, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University
Contact: Ning Yang, yangningyingji@126.com
Sequence author(s): Ning Yang
Released Date: 2019-04-03
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: FALCON v0.3.0
Sequencing & coverage: PacBio 86.5
Download: DNA GFF RNA Protein
Publication(s): Ning Yang, et al. Genome assembly of a tropical maize inbred line provides insights into structural variation and crop improvement. Nature Genetics. 2019, 51, 1052-1059

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHAACS00000000	-	the genome of SK	Draft genome in chromosome level	2019-04-03	DNA GFF RNA Protein
GWHAACS00000000.1	-	SK genome	Draft genome in chromosome level	2019-06-13	DNA GFF RNA Protein

Genome size (bp)	2,162,520,538
GC content	46.75%
Chromosomes sequence No.	10
Genome sequence No.	671
Maximum genome sequence length (bp)	301,378,628
Minimum genome sequence length (bp)	18,433
Average genome sequence length (bp)	3,222,832
Genome sequence N50 (bp)	223,742,829
Genome sequence N90 (bp)	164,733,406

Annotation of Whole Genome Assembly

Annotation Details