- Scientific Name
- Scleromitrula shiraiana
- Common Names
- -
- Bioproject
- PRJCA002530
- Biosample
- SAMC159003
- Accession No.
- GWHACFG00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Silkworm Genome Biology, Southwest University
- Contact
- Zhiyuan Lv, lvzhiyuan88@yeah.net
- Sequence author(s)
- Zhiyuan Lv
- Released Date
- 2020-12-03
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- SMRT Link v5.1.0
- Sequencing & coverage
- PacBio 87.0
- Download
-
DNA
GFF
RNA
Protein
- Publication(s)
- Zhiyuan Lv, et al. Genome Sequencing Analysis of Scleromitrula shiraiana, a Causal Agent of Mulberry Sclerotial Disease With Narrow Host Range. Frontiers in Microbiology. 2021, 11: 603927.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHACFG00000000 | - | Ssh001 | Draft genome in contig level | 2020-12-03 |
DNA
GFF
RNA
Protein
|
| GWHACFG00000000.1 | - | Ssh001 | Draft genome in contig level | 2020-12-24 |
|
Statistics of Genome Assembly
| Genome size (bp) | 39,026,199 |
| GC content | 38.86% |
| Contig sequence No. | 21 |
| Maximum contig sequence length (bp) | 4,961,314 |
| Minimum contig sequence length (bp) | 4,623 |
| Average contig sequence length (bp) | 1,858,390 |
| Contig N50 (bp) | 3,617,713 |
| Contig N90 (bp) | 1,563,214 |
Annotation of Whole Genome Assembly
| Pseudogene | Total | |
|---|---|---|
| Total | 8,308 | 8,308 |