Genome Warehouse

Scientific Name: Scutellaria baicalensis
Common Names: Baikal skullcap;
Bioproject: PRJCA003374
Biosample: SAMC232078
Accession No.: GWHAOTC00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: -
Submitter Organization: Shanghai Chen Shan Botanical Garden, Shanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences
Contact: Jie Liu, 770302187@qq.com
Sequence author(s): Qing Zhao, Jun Yang, Meng-ying Cui, Jie Liu, Yumin Fang, Mengxiao Yan, Wenqing Qiu, Huiwen Shang, Zhicheng Xu, Reheman Yidiresi, Jing-Ke Weng, Tomáš Pluskal, Marielle Vigouroux, Burkhard Steuernagel, Yukun Wei, Lei Yang, Yonghong Hu, Xiao-ya Chen, Cathie Martin
Released Date: 2020-10-17
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: Hi-C 1.0
Sequencing & coverage: PacBio 99.78
Download: DNA GFF RNA Protein
Publication(s): Qing Zhao, et al. The Reference Genome Sequence of Scutellaria baicalensis Provides Insights into the Evolution of Wogonin Biosynthesis.. Molecular plant. 2019, 12(7): 935- 950.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHAOTC00000000	-	Sbg03	Draft genome in chromosome level	2020-10-17	DNA GFF RNA Protein

Genome size (bp)	386,669,368
GC content	34.24%
Genome sequence No.	114
Maximum genome sequence length (bp)	87,954,016
Minimum genome sequence length (bp)	21,673
Average genome sequence length (bp)	3,391,837
Genome sequence N50 (bp)	37,273,076
Genome sequence N90 (bp)	28,377,922

Annotation of Whole Genome Assembly

	Protein	Others	Total
Total	28,733	6	28,739