- Scientific Name
- Crossoptilon mantchuricum
- Common Names
- brown eared-pheasant;
- Bioproject
- PRJCA003284
- Biosample
- SAMC226739
- Accession No.
- GWHAOPW00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR175821
- GVM variations of the species
- -
- Submitter Organization
- College of Life Sciences, Beijing Normal University
- Contact
- Pengcheng Wang, wpc@mail.bnu.edu.cn
- Sequence author(s)
- Pengcheng Wang, John Burley, Yang Liu, Jiang Chang, De Chen, Qi Lu, Shou-hsien Li, Xuming Zhou, Scott Edwards, Zhengwang Zhang
- Released Date
- 2020-12-16
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- AllPaths ALLPATHS-LG v. 52488
- Sequencing & coverage
- Illumina HiSeq 2500 195.6
- Download
-
DNA
- Publication(s)
- Pengcheng Wang, et al. Genomic Consequences of Long-Term Population Decline in Brown Eared Pheasant. Molecular Biology and Evolution. 2020.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAOPW00000000 | - | cma1 | Draft genome in scaffold level | 2020-12-16 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,013,459,392 |
| GC content | 41.04% |
| Scaffold sequence No. | 2,416 |
| Maximum scaffold sequence length (bp) | 14,280,873 |
| Minimum scaffold sequence length (bp) | 878 |
| Average scaffold sequence length (bp) | 419,478 |
| Scaffold N50 (bp) | 3,632,751 |
| Scaffold N90 (bp) | 974,879 |