Scientific Name
Severe acute respiratory syndrome coronavirus 2
Common Names
-
Bioproject
PRJCA003179
Biosample
SAMC204256
Accession No.
GWHAOKM01000000
GWH reannotation accession
-
GSA raw reads
CRR176047
GVM variations of the species
16,114 (SNP), 820 (Indel)
Submitter Organization
National Genomics Data Center, Beijing Institute of Genomics, Chinese Academy of Sciences / China National Center for Bioinformation
Contact
Cuiping Li, licp@big.ac.cn
Sequence author(s)
Nazish Badar, Aamer Ikram, Muhammad Salman, Massab Umair, Hamza Ahmad Mirza, Abdul Ahad, Sana Tamim, Asiya Israr, Irfan Hussain, Amir Ali Abbasi, Bing Zhang, Mingkun Li, Cuiping Li, Shuhui Song, Meili Chen, Wenming Zhao, Yiming Bao, Yongbiao Xue, Yungui Yang
Released Date
2021-03-03
Assembly Level
Complete genome
Genome Representation
Full Genome
Assembly method
BWA 0.7.10-r789
Sequencing & coverage
Illumina 111362
Download
DNA GFF RNA Protein
Publication(s)
Shuhui Song, et al. Genomic Epidemiology of SARS-CoV-2 in Pakistan. Genomics, Proteomics & Bioinformatics. 2021.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHAOKM01000000 - SARS-CoV-2_35 Complete genome 2021-03-03 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 29,903
GC content 37.93%
Annotation of Whole Genome Assembly
Protein Total
Total 12 12