- GVM / Search / osa5
Basic Information
SNP ID |
osa5
|
Organism |
Oryza sativa Japonica |
Genome Assembly |
IRGSP1.0 |
Version |
1
|
Variation Class |
SNP
|
Position |
chr1:1223 |
RefSNP Alleles |
G/C |
Synonyms ID |
|
Gene Annotation
Gene ID |
Transcript ID |
Gene Symbol |
Variant Effect |
Biotype |
cDNA Position |
Allele Change |
Protein ID |
Protein Position |
Residue Change |
Os01g0100100
|
Os01t0100100-01
|
- |
upstream_gene_variant |
mRNA |
0
|
-
=> -
|
Os01t0100100-01 |
0
|
-
=> -
|
Population Diversity
Population |
Sample # |
Allele:Frequency |
Genotype:Frequency |
Indica |
2567 |
G:1.00; C:0.00; |
GG:1.00; |
japonica |
1499 |
G:0.99; C:0.01; |
GG:0.99; CC:0.01; |
Other |
635 |
G:1.00; C:0.00; |
GG:1.00; |
wild |
451 |
G:1.00; C:0.00; |
GG:1.00; |