Equus ferus
The EquCab2 (the horse’ genome) assembly is a whole genome shotgun (WGS) assembly at 6.79x. A female thoroughbred named "Twilight" was selected as the representative horse for genome sequencing [1]. It has the following information:
● Number of Chromosomes: 32
● Number of Unplaced Scaffolds: 9604
● Number of Protein-coding Genes: 20,449
● Number of transcripts: 29,196
● Ludovic Orlando er. al. 2013 Re-sequenced 20 domestic horse breeds and wild horses [3].
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2.Sarkissian CD, Ermini L, Schubert M, Yang MA, Librado P, Fumagalli M, Jonsson H, Bar-Gal GK, Albrechtsen A, Vieira FG, Petersen B, Ginolhac A, Seguin-Orlando A, Magnussen K, Fages A, Gamba C, Lorente-Galdos B, Polani S, Steiner C, Neuditschko M, Jagannathan V, Feh C, Greenblatt CL, Ludwig A, Abramson NI, Zimmermann W, Schafberg R, Tikhonov A, Sicheritz-Ponten T, Willerslev E, Marques-Bonet T, Ryder OA, McCue M, Rieder S, Leeb T, Slatkin M, Orlando L: Evolutionary Genomics and Conservation of the Endangered Przewalski's Horse. Curr Biol 2015, 25(19):2577-2583. [PMID=26412128]
3.Orlando L, Ginolhac A, Zhang GJ, Froese D, Albrechtsen A, Stiller M, Schubert M, Cappellini E, Petersen B, Moltke I, Johnson PLF, Fumagalli M, Vilstrup JT, Raghavan M, Korneliussen T, Malaspinas AS, Vogt J, Szklarczyk D, Kelstrup CD, Vinther J, Dolocan A, Stenderup J, Velazquez AMV, Cahill J, Rasmussen M, Wang XL, Min JM, Zazula GD, Seguin-Orlando A, Mortensen C, Magnussen K, Thompson JF, Weinstock J, Gregersen K, Roed KH, Eisenmann V, Rubin CJ, Miller DC, Antczak DF, Bertelsen MF, Brunak S, Al-Rasheid KAS, Ryder O, Andersson L, Mundy J, Krogh A, Gilbert MTP, Kjaer K, Sicheritz-Ponten T, Jensen LJ, Olsen JV, Hofreiter M, Nielsen R, Shapiro B, Wang J, Willerslev E: Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse. Nature 2013, 499(7456):74-+. [PMID=23803765]