Cucumis sativus
In 2009, the genome of the cucumber was sequenced by an international team [1]. In 2017, the version B10v2 of the cultivar Borszczagowski was published by the PCC Genomics - Polish Consortium of Cucumber Genome Sequencing. The total length of all scaffolds is 343.7Mb, and it has the following facts:
● Total assembly gap length: 0
● Number of contigs: 8,035
● Contig N50: 857,3074
● Contig L50: 55
● Total number of chromosomes and plasmids : 0
[1] Huang S, Li R, Zhang Z, Li L, Gu X, Fan W, Lucas WJ, Wang X, Xie B, Ni P, Ren Y, Zhu H, Li J, Lin K, Jin W, Fei Z, Li G, Staub J, Kilian A, van der Vossen EA, Wu Y, Guo J, He J, Jia Z, Ren Y, Tian G, Lu Y, Ruan J, Qian W, Wang M, Huang Q, Li B, Xuan Z, Cao J, Asan, Wu Z, Zhang J, Cai Q, Bai Y, Zhao B, Han Y, Li Y, Li X, Wang S, Shi Q, Liu S, Cho WK, Kim JY, Xu Y, Heller-Uszynska K, Miao H, Cheng Z, Zhang S, Wu J, Yang Y, Kang H, Li M, Liang H, Ren X, Shi Z, Wen M, Jian M, Yang H, Zhang G, Yang Z, Chen R, Liu S, Li J, Ma L, Liu H, Zhou Y, Zhao J, Fang X, Li G, Fang L, Li Y, Liu D, Zheng H, Zhang Y, Qin N, Li Z, Yang G, Yang S, Bolund L, Kristiansen K, Zheng H, Li S, Zhang X, Yang H, Wang J, Sun R, Zhang B, Jiang S, Wang J, Du Y, Li S: The genome of the cucumber, Cucumis sativus L. Nature genetics 2009, 41(12):1275-1281. [PMID=19881527]
[2] Qi J, Liu X, Shen D, Miao H, Xie B, Li X, Zeng P, Wang S, Shang Y, Gu X, Du Y, Li Y, Lin T, Yuan J, Yang X, Chen J, Chen H, Xiong X, Huang K, Fei Z, Mao L, Tian L, Stadler T, Renner SS, Kamoun S, Lucas WJ, Zhang Z, Huang S: A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity. Nature genetics 2013, 45(12):1510-1515. [PMID=24141363]