CRA001872 Information
Title: Profiling rice microbiome using an improved 16S-seq method
BioProject: PRJCA001629 /
Release date: 2020-01-04
Files: 108
File size: 3.99 GB
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX056483 16S amplicon sequencing of bulk soil microbiome sample Bs1171-4 soil metagenome Illumina HiSeq 2500 SAMC088251
Run accession Run alias Run data file information
CRR062558 Bs1171-4 File: CRR062558_f1.fq.gz
File: CRR062558_r2.fq.gz
CRX056482 16S amplicon sequencing of bulk soil microbiome sample Bs1171-3 soil metagenome Illumina HiSeq 2500 SAMC088250
Run accession Run alias Run data file information
CRR062557 Bs1171-3 File: CRR062557_f1.fq.gz
File: CRR062557_r2.fq.gz
CRX056481 16S amplicon sequencing of bulk soil microbiome sample Bs1171-2 soil metagenome Illumina HiSeq 2500 SAMC088249
Run accession Run alias Run data file information
CRR062556 Bs1171-2 File: CRR062556_f1.fq.gz
File: CRR062556_r2.fq.gz
CRX056480 16S amplicon sequencing of bulk soil microbiome sample Bs1171-1 soil metagenome Illumina HiSeq 2500 SAMC088248
Run accession Run alias Run data file information
CRR062555 Bs1171-1 File: CRR062555_f1.fq.gz
File: CRR062555_r2.fq.gz
CRX056479 16S amplicon sequencing of bulk soil microbiome sample Bs1048-6 soil metagenome Illumina HiSeq 2500 SAMC088247
Run accession Run alias Run data file information
CRR062554 Bs1048-6 File: CRR062554_f1.fq.gz
File: CRR062554_r2.fq.gz
CRX056478 16S amplicon sequencing of bulk soil microbiome sample Bs1048-5 soil metagenome Illumina HiSeq 2500 SAMC088246
Run accession Run alias Run data file information
CRR062553 Bs1048-5 File: CRR062553_f1.fq.gz
File: CRR062553_r2.fq.gz
CRX056477 16S amplicon sequencing of bulk soil microbiome sample Bs1048-4 soil metagenome Illumina HiSeq 2500 SAMC088245
Run accession Run alias Run data file information
CRR062552 Bs1048-4 File: CRR062552_f1.fq.gz
File: CRR062552_r2.fq.gz
CRX056476 16S amplicon sequencing of bulk soil microbiome sample Bs1048-3 soil metagenome Illumina HiSeq 2500 SAMC088244
Run accession Run alias Run data file information
CRR062551 Bs1048-3 File: CRR062551_f1.fq.gz
File: CRR062551_r2.fq.gz
CRX056475 16S amplicon sequencing of bulk soil microbiome sample Bs1048-2 soil metagenome Illumina HiSeq 2500 SAMC088243
Run accession Run alias Run data file information
CRR062550 Bs1048-2 File: CRR062550_f1.fq.gz
File: CRR062550_r2.fq.gz
CRX056474 16S amplicon sequencing of bulk soil microbiome sample Bs1048-1 soil metagenome Illumina HiSeq 2500 SAMC088242
Run accession Run alias Run data file information
CRR062549 Bs1048-1 File: CRR062549_f1.fq.gz
File: CRR062549_r2.fq.gz
CRX056467 16S amplicon sequencing of rice root microbiome sample 2OsRE3-6 root metagenome Illumina MiSeq SAMC088235
Run accession Run alias Run data file information
CRR062542 2OsRE3-6 File: CRR062542_f1.fastq.gz
File: CRR062542_r2.fastq.gz
CRX056466 16S amplicon sequencing of rice root microbiome sample 2OsRE3-5 root metagenome Illumina MiSeq SAMC088234
Run accession Run alias Run data file information
CRR062541 2OsRE3-5 File: CRR062541_f1.fastq.gz
File: CRR062541_r2.fastq.gz
CRX056465 16S amplicon sequencing of rice root microbiome sample 2OsRE3-4 root metagenome Illumina MiSeq SAMC088233
Run accession Run alias Run data file information
CRR062540 2OsRE3-4 File: CRR062540_f1.fastq.gz
File: CRR062540_r2.fastq.gz
CRX056464 16S amplicon sequencing of rice root microbiome sample 2OsRE3-3 root metagenome Illumina MiSeq SAMC088232
Run accession Run alias Run data file information
CRR062539 2OsRE3-3 File: CRR062539_f1.fastq.gz
File: CRR062539_r2.fastq.gz
CRX056463 16S amplicon sequencing of rice root microbiome sample 2OsRE3-2 root metagenome Illumina MiSeq SAMC088231
Run accession Run alias Run data file information
CRR062538 2OsRE3-2 File: CRR062538_f1.fastq.gz
File: CRR062538_r2.fastq.gz
CRX056462 16S amplicon sequencing of rice root microbiome sample 2OsRE3-1 root metagenome Illumina MiSeq SAMC088230
Run accession Run alias Run data file information
CRR062537 2OsRE3-1 File: CRR062537_f1.fastq.gz
File: CRR062537_r2.fastq.gz
CRX056461 16S amplicon sequencing of rice root microbiome sample 2OsRE2-3 root metagenome Illumina MiSeq SAMC088229
Run accession Run alias Run data file information
CRR062536 2OsRE2-3 File: CRR062536_f1.fastq.gz
File: CRR062536_r2.fastq.gz
CRX056460 16S amplicon sequencing of rice root microbiome sample 2OsRE2-2 root metagenome Illumina MiSeq SAMC088228
Run accession Run alias Run data file information
CRR062535 2OsRE2-2 File: CRR062535_f1.fastq.gz
File: CRR062535_r2.fastq.gz
CRX056459 16S amplicon sequencing of rice root microbiome sample 2OsRE2-1 root metagenome Illumina MiSeq SAMC088227
Run accession Run alias Run data file information
CRR062534 2OsRE2-1 File: CRR062534_f1.fastq.gz
File: CRR062534_r2.fastq.gz
CRX056458 16S amplicon sequencing of rice root microbiome sample 2OsRE1-3 root metagenome Illumina MiSeq SAMC088226
Run accession Run alias Run data file information
CRR062533 2OsRE1-3 File: CRR062533_f1.fastq.gz
File: CRR062533_r2.fastq.gz
Submitter:Lu yang Song (lyang.s@webmail.hzau.edu.cn)
Organization:National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University
Date submitted:2019-08-03