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CRA002599 Information

Title: Epithelial Cells in 2D and 3D Culture Exhibit Large Differences in Higher-Order Genomic Interactions

BioProject: PRJCA002611 /

Release date: 2020-05-02

Files: 16

File size: 124.91 GB

Publication

Article title

Epithelial Cells in 2D and 3D Cultures Exhibit Large Differences in Higher-order Genomic Interactions

Journal name

Genomics, Proteomics & Bioinformatics

Year

2021

DOI

10.1016/j.gpb.2020.06.017

PubMed ID

33631432

Dataset Downlaod

MetaData:

CRA002599.xlsx

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Experiments & Runs

Experiment accession	Title	Taxon name	Platform	Sample accession
CRX108438	3D Hi-C rep2	Mus musculus	Illumina HiSeq X Ten	SAMC182405
Run accession	Run alias		Run data file information
CRR133862	3D Hi-C rep2		File: CRR133862_f1.fastq.gz File: CRR133862_r2.fastq.gz
CRX108437	3D Hi-C rep1	Mus musculus	Illumina HiSeq X Ten	SAMC182404
Run accession	Run alias		Run data file information
CRR133861	3D Hi-C rep1		File: CRR133861_f1.fastq.gz File: CRR133861_r2.fastq.gz
CRX108436	2D Hi-C rep2	Mus musculus	Illumina HiSeq X Ten	SAMC182403
Run accession	Run alias		Run data file information
CRR133860	2D Hi-C rep2		File: CRR133860_f1.fastq.gz File: CRR133860_r2.fastq.gz
CRX108435	2D Hi-C rep1	Mus musculus	Illumina HiSeq X Ten	SAMC182402
Run accession	Run alias		Run data file information
CRR133859	2D Hi-C rep1		File: CRR133859_f1.fastq.gz File: CRR133859_r2.fastq.gz
CRX108434	3D RNA-seq rep2	Mus musculus	Illumina HiSeq X Ten	SAMC182401
Run accession	Run alias		Run data file information
CRR133858	3D RNA-seq rep2		File: CRR133858_f1.fastq.gz File: CRR133858_r2.fastq.gz
CRX108433	3D RNA-seq rep1	Mus musculus	Illumina HiSeq X Ten	SAMC182400
Run accession	Run alias		Run data file information
CRR133857	3D RNA-seq rep1		File: CRR133857_f1.fastq.gz File: CRR133857_r2.fastq.gz
CRX108432	2D RNA-seq rep2	Mus musculus	Illumina HiSeq X Ten	SAMC182399
Run accession	Run alias		Run data file information
CRR133856	2D RNA-seq rep2		File: CRR133856_f1.fastq.gz File: CRR133856_r2.fastq.gz
CRX108431	2D RNA-seq rep1	Mus musculus	Illumina HiSeq X Ten	SAMC182398
Run accession	Run alias		Run data file information
CRR133855	2D RNA-seq rep1		File: CRR133855_f1.fastq.gz File: CRR133855_r2.fastq.gz

Submitter:HUA LI (kaikaixinxin@sjtu.edu.cn)

Organization:Shanghai Jiao Tong University

Date submitted:2020-04-29