CRA003188 Information
Title: In vivo genome editing restores dystrophin expression in Duchenne muscular dystrophy patient muscle fibers
BioProject: PRJCA003361 /
Release date: 2020-11-24
Files: 252
File size: 178.17 GB
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX152444 E50-gRNA-unedited (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232472
Run accession Run alias Run data file information
CRR180016 E50-gRNA-unedited-1 (Amplicon-seq) File: CRR180016_f1.fq.gz
File: CRR180016_r2.fq.gz
CRR180017 E50-gRNA-unedited-2 (Amplicon-seq) File: CRR180017_f1.fq.gz
File: CRR180017_r2.fq.gz
CRR180018 E50-gRNA-unedited-3 (Amplicon-seq) File: CRR180018_f1.fq.gz
File: CRR180018_r2.fq.gz
CRX152443 E50-gRNA-target (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232471
Run accession Run alias Run data file information
CRR180013 E50-gRNA-target-1 (Amplicon-seq) File: CRR180013_f1.fq.gz
File: CRR180013_r2.fq.gz
CRR180014 E50-gRNA-target-2 (Amplicon-seq) File: CRR180014_f1.fq.gz
File: CRR180014_r2.fq.gz
CRR180015 E50-gRNA-target-3 (Amplicon-seq) File: CRR180015_f1.fq.gz
File: CRR180015_r2.fq.gz
CRX152442 E50-gRNA-mock (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232470
Run accession Run alias Run data file information
CRR180010 E50-gRNA-mock-1 (Amplicon-seq) File: CRR180010_f1.fq.gz
File: CRR180010_r2.fq.gz
CRR180011 E50-gRNA-mock-2 (Amplicon-seq) File: CRR180011_f1.fq.gz
File: CRR180011_r2.fq.gz
CRR180012 E50-gRNA-mock-3 (Amplicon-seq) File: CRR180012_f1.fq.gz
File: CRR180012_r2.fq.gz
CRX152441 E50-gRNA-cas9 (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232469
Run accession Run alias Run data file information
CRR180007 E50-gRNA-cas9-1 (Amplicon-seq) File: CRR180007_f1.fq.gz
File: CRR180007_r2.fq.gz
CRR180008 E50-gRNA-cas9-2 (Amplicon-seq) File: CRR180008_f1.fq.gz
File: CRR180008_r2.fq.gz
CRR180009 E50-gRNA-cas9-3 (Amplicon-seq) File: CRR180009_f1.fq.gz
File: CRR180009_r2.fq.gz
CRX152440 IN54-Cas9-gRNA-unedited (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232468
Run accession Run alias Run data file information
CRR180004 IN54-Cas9-gRNA-unedited-1 (Amplicon-seq) File: CRR180004_f1.fq.gz
File: CRR180004_r2.fq.gz
CRR180005 IN54-Cas9-gRNA-unedited-2 (Amplicon-seq) File: CRR180005_f1.fq.gz
File: CRR180005_r2.fq.gz
CRR180006 IN54-Cas9-gRNA-unedited-3 (Amplicon-seq) File: CRR180006_f1.fq.gz
File: CRR180006_r2.fq.gz
CRX152439 IN54-Cas9-gRNA-target (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232467
Run accession Run alias Run data file information
CRR180001 IN54-Cas9-gRNA-target-1 (Amplicon-seq) File: CRR180001_f1.fq.gz
File: CRR180001_r2.fq.gz
CRR180002 IN54-Cas9-gRNA-target-2 (Amplicon-seq) File: CRR180002_f1.fq.gz
File: CRR180002_r2.fq.gz
CRR180003 IN54-Cas9-gRNA-target-3 (Amplicon-seq) File: CRR180003_f1.fq.gz
File: CRR180003_r2.fq.gz
CRX152438 IN54-Cas9-gRNA-mock (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232466
Run accession Run alias Run data file information
CRR179998 IN54-Cas9-gRNA-mock-1 (Amplicon-seq) File: CRR179998_f1.fq.gz
File: CRR179998_r2.fq.gz
CRR179999 IN54-Cas9-gRNA-mock-2 (Amplicon-seq) File: CRR179999_f1.fq.gz
File: CRR179999_r2.fq.gz
CRR180000 IN54-Cas9-gRNA-mock-3 (Amplicon-seq) File: CRR180000_f1.fq.gz
File: CRR180000_r2.fq.gz
CRX152437 IN54-Cas9-gRNA-cas9 (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232465
Run accession Run alias Run data file information
CRR179995 IN54-Cas9-gRNA-cas9-1 (Amplicon-seq) File: CRR179995_f1.fq.gz
File: CRR179995_r2.fq.gz
CRR179996 IN54-Cas9-gRNA-cas9-2 (Amplicon-seq) File: CRR179996_f1.fq.gz
File: CRR179996_r2.fq.gz
CRR179997 IN54-Cas9-gRNA-cas9-3 (Amplicon-seq) File: CRR179997_f1.fq.gz
File: CRR179997_r2.fq.gz
CRX152436 IN45-Cas9-gRNA-unedited (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232464
Run accession Run alias Run data file information
CRR179992 IN45-Cas9-gRNA-unedited-1 (Amplicon-seq) File: CRR179992_f1.fq.gz
File: CRR179992_r2.fq.gz
CRR179993 IN45-Cas9-gRNA-unedited-2 (Amplicon-seq) File: CRR179993_f1.fq.gz
File: CRR179993_r2.fq.gz
CRR179994 IN45-Cas9-gRNA-unedited-3 (Amplicon-seq) File: CRR179994_f1.fq.gz
File: CRR179994_r2.fq.gz
CRX152435 IN45-Cas9-gRNA-target (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232463
Run accession Run alias Run data file information
CRR179989 IN45-Cas9-gRNA-target-1 (Amplicon-seq) File: CRR179989_f1.fq.gz
File: CRR179989_r2.fq.gz
CRR179990 IN45-Cas9-gRNA-target-2 (Amplicon-seq) File: CRR179990_f1.fq.gz
File: CRR179990_r2.fq.gz
CRR179991 IN45-Cas9-gRNA-target-3 (Amplicon-seq) File: CRR179991_f1.fq.gz
File: CRR179991_r2.fq.gz
CRX152434 IN45-Cas9-gRNA-mock (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232462
Run accession Run alias Run data file information
CRR179986 IN45-Cas9-gRNA-mock-1 (Amplicon-seq) File: CRR179986_f1.fq.gz
File: CRR179986_r2.fq.gz
CRR179987 IN45-Cas9-gRNA-mock-2 (Amplicon-seq) File: CRR179987_f1.fq.gz
File: CRR179987_r2.fq.gz
CRR179988 IN45-Cas9-gRNA-mock-3 (Amplicon-seq) File: CRR179988_f1.fq.gz
File: CRR179988_r2.fq.gz
CRX152433 IN45-Cas9-gRNA-cas9 (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232461
Run accession Run alias Run data file information
CRR179983 IN45-Cas9-gRNA-cas9-1 (Amplicon-seq) File: CRR179983_f1.fq.gz
File: CRR179983_r2.fq.gz
CRR179984 IN45-Cas9-gRNA-cas9-2 (Amplicon-seq) File: CRR179984_f1.fq.gz
File: CRR179984_r2.fq.gz
CRR179985 IN45-Cas9-gRNA-cas9-3 (Amplicon-seq) File: CRR179985_f1.fq.gz
File: CRR179985_r2.fq.gz
CRX152432 IN55-gRNA-unedited (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232460
Run accession Run alias Run data file information
CRR179980 IN55-gRNA-unedited-1 (Amplicon-seq) File: CRR179980_f1.fq.gz
File: CRR179980_r2.fq.gz
CRR179981 IN55-gRNA-unedited-2 (Amplicon-seq) File: CRR179981_f1.fq.gz
File: CRR179981_r2.fq.gz
CRR179982 IN55-gRNA-unedited-3 (Amplicon-seq) File: CRR179982_f1.fq.gz
File: CRR179982_r2.fq.gz
CRX152431 IN55-gRNA-target (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232459
Run accession Run alias Run data file information
CRR179977 IN55-gRNA-target-1 (Amplicon-seq) File: CRR179977_f1.fq.gz
File: CRR179977_r2.fq.gz
CRR179978 IN55-gRNA-target-2 (Amplicon-seq) File: CRR179978_f1.fq.gz
File: CRR179978_r2.fq.gz
CRR179979 IN55-gRNA-target-3 (Amplicon-seq) File: CRR179979_f1.fq.gz
File: CRR179979_r2.fq.gz
CRX152430 IN55-gRNA-mock (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232458
Run accession Run alias Run data file information
CRR179974 IN55-gRNA-mock-1 (Amplicon-seq) File: CRR179974_f1.fq.gz
File: CRR179974_r2.fq.gz
CRR179975 IN55-gRNA-mock-2 (Amplicon-seq) File: CRR179975_f1.fq.gz
File: CRR179975_r2.fq.gz
CRR179976 IN55-gRNA-mock-3 (Amplicon-seq) File: CRR179976_f1.fq.gz
File: CRR179976_r2.fq.gz
CRX152429 IN55-gRNA-cas9 (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232457
Run accession Run alias Run data file information
CRR179971 IN55-gRNA-cas9-1 (Amplicon-seq) File: CRR179971_f1.fq.gz
File: CRR179971_r2.fq.gz
CRR179972 IN55-gRNA-cas9-2 (Amplicon-seq) File: CRR179972_f1.fq.gz
File: CRR179972_r2.fq.gz
CRR179973 IN55-gRNA-cas9-3 (Amplicon-seq) File: CRR179973_f1.fq.gz
File: CRR179973_r2.fq.gz
CRX152428 IN44-gRNA-unedited (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232456
Run accession Run alias Run data file information
CRR179968 IN44-gRNA-unedited-1 (Amplicon-seq) File: CRR179968_f1.fq.gz
File: CRR179968_r2.fq.gz
CRR179969 IN44-gRNA-unedited-2 (Amplicon-seq) File: CRR179969_f1.fq.gz
File: CRR179969_r2.fq.gz
CRR179970 IN44-gRNA-unedited-3 (Amplicon-seq) File: CRR179970_f1.fq.gz
File: CRR179970_r2.fq.gz
CRX152427 IN44-gRNA-target (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232455
Run accession Run alias Run data file information
CRR179965 IN44-gRNA-target-1 (Amplicon-seq) File: CRR179965_f1.fq.gz
File: CRR179965_r2.fq.gz
CRR179966 IN44-gRNA-target-2 (Amplicon-seq) File: CRR179966_f1.fq.gz
File: CRR179966_r2.fq.gz
CRR179967 IN44-gRNA-target-3 (Amplicon-seq) File: CRR179967_f1.fq.gz
File: CRR179967_r2.fq.gz
CRX152426 IN44-gRNA-mock (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232454
Run accession Run alias Run data file information
CRR179962 IN44-gRNA-mock-1 (Amplicon-seq) File: CRR179962_f1.fq.gz
File: CRR179962_r2.fq.gz
CRR179963 IN44-gRNA-mock-2 (Amplicon-seq) File: CRR179963_f1.fq.gz
File: CRR179963_r2.fq.gz
CRR179964 IN44-gRNA-mock-3 (Amplicon-seq) File: CRR179964_f1.fq.gz
File: CRR179964_r2.fq.gz
CRX152425 IN44-gRNA-cas9 (Amplicon-seq) Homo sapiens Illumina NovaSeq 5000 SAMC232453
Run accession Run alias Run data file information
CRR179959 IN44-gRNA-cas9-1 (Amplicon-seq) File: CRR179959_f1.fq.gz
File: CRR179959_r2.fq.gz
CRR179960 IN44-gRNA-cas9-2 (Amplicon-seq) File: CRR179960_f1.fq.gz
File: CRR179960_r2.fq.gz
CRR179961 IN44-gRNA-cas9-3 (Amplicon-seq) File: CRR179961_f1.fq.gz
File: CRR179961_r2.fq.gz
Submitter:Xiaoping Li (lixiaoping@mail.sysu.edu.cn)
Organization:Sun Yat-sen University
Date submitted:2020-09-07