| Accession | CRX152221 |
| Organism | Salvia miltiorrhiza |
| Title | Hi-C |
| BioProject | PRJCA003392 |
| BioSample | SAMC233308 |
| Platform | Illumina NovaSeq 6000 |
| Library |
| Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
|
Genomic DNA was extracted from leaves with a standard CTAB method. DNA purity was verified by spectroscopic analysis with NanoDrop Spectrophotometers (Thermo Scientific). The Illumina paired-end genome library was constructed according to the standard protocol and seven paired-end Illumina WGS libraries were constructed with multiple insert sizes (200 bp, 450 bp 500 bp, 800 bp, 2 kb, 5 kb, 10 kb and 20 kb), which were then sequenced on a HiSeq 2500 platform. |
WGS |
GENOMIC |
unspecified |
PAIRED
|
|
| Processing |
Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Insert size (bp): 100
|
| Release date | 2020-09-11 |
|---|
| Run |
| Run accession |
Run data file information |
| File name | File size (MB) |
|---|
| CRR179733 |
CRR179733_f1.fastq.gz
CRR179733_r2.fastq.gz
|
14,699.76
15,328.15
|
| CRR179734 |
CRR179734_f1.fastq.gz
CRR179734_r2.fastq.gz
|
3,280.73
3,470.21
|
|
| Submitter | Tong Chen (chent@nrc.ac.cn) |
|---|
| Organization | NRC |
|---|
| Date submitted | 2020-09-06 |
|---|
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