CRA002789 Information
Title: Characterization of accessible chromatin regions reveals their functional interrelations with gene transcription and epigenetic modifications in Sorghum bicolor genome
BioProject: PRJCA002844 /
Release date: 2020-07-10
Files: 32
File size: 90.95 GB
Publication
Journal name
Plant Communications
Year
2021
DOI
10.1016/j.xplc.2020.100140
PubMed ID
33511349

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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX119199 BS-seq Sorghum bicolor Illumina NovaSeq 6000 SAMC193431
Run accession Run alias Run data file information
CRR145305 BS-seq File: CRR145305_f1.fastq.gz
File: CRR145305_r2.fastq.gz
CRX119198 RNA-seq_rep3 Sorghum bicolor Illumina NovaSeq 6000 SAMC193430
Run accession Run alias Run data file information
CRR145304 RNA-seq_rep3 File: CRR145304_f1.fastq.gz
File: CRR145304_r2.fastq.gz
CRX119197 RNA-seq_rep2 Sorghum bicolor Illumina NovaSeq 6000 SAMC193429
Run accession Run alias Run data file information
CRR145303 RNA-seq_rep2 File: CRR145303_f1.fastq.gz
File: CRR145303_r2.fastq.gz
CRX119196 RNA-seq_rep1 Sorghum bicolor Illumina NovaSeq 6000 SAMC193428
Run accession Run alias Run data file information
CRR145302 RNA-seq_rep1 File: CRR145302_f1.fastq.gz
File: CRR145302_r2.fastq.gz
CRX119195 Input_rep4 Sorghum bicolor Illumina NovaSeq 6000 SAMC193427
Run accession Run alias Run data file information
CRR145301 Input_rep4 File: CRR145301_f1.fastq.gz
File: CRR145301_r2.fastq.gz
CRX119194 Input_rep3 Sorghum bicolor Illumina NovaSeq 6000 SAMC193426
Run accession Run alias Run data file information
CRR145300 Input_rep3 File: CRR145300_f1.fastq.gz
File: CRR145300_r2.fastq.gz
CRX119193 Input_rep2 Sorghum bicolor Illumina NovaSeq 6000 SAMC193425
Run accession Run alias Run data file information
CRR145299 Input_rep2 File: CRR145299_f1.fastq.gz
File: CRR145299_r2.fastq.gz
CRX119192 Input_rep1 Sorghum bicolor Illumina NovaSeq 6000 SAMC193424
Run accession Run alias Run data file information
CRR145298 Input_rep1 File: CRR145298_f1.fastq.gz
File: CRR145298_r2.fastq.gz
CRX119191 6mA-IP-seq_rep4 Sorghum bicolor Illumina NovaSeq 6000 SAMC193423
Run accession Run alias Run data file information
CRR145297 6mA-IP-seq_rep4 File: CRR145297_f1.fastq.gz
File: CRR145297_r2.fastq.gz
CRX119190 6mA-IP-seq_rep3 Sorghum bicolor Illumina NovaSeq 6000 SAMC193422
Run accession Run alias Run data file information
CRR145296 6mA-IP-seq_rep3 File: CRR145296_f1.fastq.gz
File: CRR145296_r2.fastq.gz
CRX119189 6mA-IP-seq_rep2 Sorghum bicolor Illumina NovaSeq 6000 SAMC193421
Run accession Run alias Run data file information
CRR145295 6mA-IP-seq_rep2 File: CRR145295_f1.fastq.gz
File: CRR145295_r2.fastq.gz
CRX119188 6mA-IP-seq_rep1 Sorghum bicolor Illumina NovaSeq 6000 SAMC193420
Run accession Run alias Run data file information
CRR145294 6mA-IP-seq_rep1 File: CRR145294_f1.fastq.gz
File: CRR145294_r2.fastq.gz
CRX119187 ATAC-seq_rep4 Sorghum bicolor Illumina NovaSeq 6000 SAMC193419
Run accession Run alias Run data file information
CRR145293 ATAC-seq_rep4 File: CRR145293_f1.fastq.gz
File: CRR145293_r2.fastq.gz
CRX119186 ATAC-seq_rep3 Sorghum bicolor Illumina NovaSeq 6000 SAMC193418
Run accession Run alias Run data file information
CRR145292 ATAC-seq_rep3 File: CRR145292_f1.fastq.gz
File: CRR145292_r2.fastq.gz
CRX119185 ATAC-seq_rep2 Sorghum bicolor Illumina NovaSeq 6000 SAMC193417
Run accession Run alias Run data file information
CRR145291 ATAC-seq_rep2 File: CRR145291_f1.fastq.gz
File: CRR145291_r2.fastq.gz
CRX119184 ATAC-seq_rep1 Sorghum bicolor Illumina NovaSeq 6000 SAMC193416
Run accession Run alias Run data file information
CRR145290 ATAC-seq_rep1 File: CRR145290_f1.fastq.gz
File: CRR145290_r2.fastq.gz
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Submitter:Chao Zhou (zhouchao@ctgu.edu.cn)
Organization:China Three Gorges University
Date submitted:2020-06-13