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CRA002500 Information
Title: 2019-nCoV genome
BioProject: PRJCA002455 /
Release date: 2020-04-01
Files: 29
File size: 1.34 GB
Publication
Article title
Identification of Common Deletions in the Spike Protein of Severe Acute Respiratory Syndrome Coronavirus 2
Journal name
Journal of Virology
Year
2020
DOI
10.1128/JVI.00790-20
PubMed ID
32571797

Article title
Clinical, immunological and virological characterization of COVID-19 patients that test re-positive for SARS-CoV-2 by RT-PCR
Journal name
EBioMedicine
Year
2020
DOI
10.1016/j.ebiom.2020.102960
PubMed ID
32853988

Dataset Downlaod
MetaData:
CRA002500.xlsx
Files:
HTTPS：https://download.cncb.ac.cn/gsa3/CRA002500
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FTP：ftp://download.big.ac.cn/gsa3/CRA002500

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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX102652 nCoV_strain_25 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC153235
Run accession Run alias Run data file information
CRR127179 nCoV_strain_25 File: CRR127179.bam
CRX102651 nCoV_strain_24 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC153234
Run accession Run alias Run data file information
CRR127178 nCoV_strain_24 File: CRR127178.bam
CRX102632 clinical_4 Severe acute respiratory syndrome coronavirus 2 Illumina MiSeq SAMC151281
Run accession Run alias Run data file information
CRR127149 clinical_4 File: CRR127149.bam
CRX102541 strain23 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150997
Run accession Run alias Run data file information
CRR126929 strain23 File: CRR126929.bam
CRX102540 strain22 Severe acute respiratory syndrome coronavirus 2 Illumina MiSeq SAMC150996
Run accession Run alias Run data file information
CRR126928 strain22 File: CRR126928.bam
CRX102539 strain21 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150995
Run accession Run alias Run data file information
CRR126927 strain21 File: CRR126927.bam
CRX102538 strain20 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150994
Run accession Run alias Run data file information
CRR126926 strain20 File: CRR126926.bam
CRX102537 strain19 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150993
Run accession Run alias Run data file information
CRR126925 strain19 File: CRR126925.bam
CRX102536 strain18 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150992
Run accession Run alias Run data file information
CRR126924 strain18 File: CRR126924.bam
CRX102535 strain17 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150991
Run accession Run alias Run data file information
CRR126923 strain17 File: CRR126923.bam
CRX102534 strain16 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150990
Run accession Run alias Run data file information
CRR126922 strain16 File: CRR126922.bam
CRX102533 strain15 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150989
Run accession Run alias Run data file information
CRR126921 strain15 File: CRR126921.bam
CRX102532 strain14 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150988
Run accession Run alias Run data file information
CRR126920 strain14 File: CRR126920.bam
CRX102531 strain13 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150987
Run accession Run alias Run data file information
CRR126919 strain13 File: CRR126919.bam
CRX102530 strain12 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150986
Run accession Run alias Run data file information
CRR126918 strain12 File: CRR126918.bam
CRX102529 strain11 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150985
Run accession Run alias Run data file information
CRR126917 strain11 File: CRR126917.bam
CRX102528 strain10 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150984
Run accession Run alias Run data file information
CRR126916 strain10 File: CRR126916.bam
CRX102527 strain9 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150983
Run accession Run alias Run data file information
CRR126915 strain9 File: CRR126915.bam
CRX102526 strain8 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150982
Run accession Run alias Run data file information
CRR126914 strain8 File: CRR126914.bam
CRX102525 strain7 Severe acute respiratory syndrome coronavirus 2 OXFORD_NANOPORE MinION SAMC150981
Run accession Run alias Run data file information
CRR126913 strain7 File: CRR126913.bam
Submitter:Zhe Liu (lzhwin@foxmail.com)
Organization:Guangdong Provincial Center for Disease Prevention and Control
Date submitted:2020-03-28