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CRA002325 Information
Title: RNA-seq of swamp buffalo
BioProject: PRJCA001297 /
Release date: 2020-02-09
Files: 48
File size: 74.43 GB
Publication
Article title
Understanding divergent domestication traits from the whole-genome sequencing of swamp and river buffalo populations
Journal name
National Science Review
Year
2020
DOI
10.1093/nsr/nwaa024
PubMed ID

Dataset Downlaod
MetaData:
CRA002325.xlsx
Files:
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX091603 RNA-seq of swamp buffalo adipose Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115993 RNA-seq of swamp buffalo adipose File: CRR115993_f1.fq.gz
File: CRR115993_r2.fq.gz
CRX091602 RNA-seq of swamp buffalo womb Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115992 RNA-seq of swamp buffalo womb File: CRR115992_f1.fq.gz
File: CRR115992_r2.fq.gz
CRX091601 RNA-seq of swamp buffalo brain brodmann area 44+45/4+6 Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115991 RNA-seq of swamp buffalo brain brodmann area 44+45/4+6 File: CRR115991_f1.fq.gz
File: CRR115991_r2.fq.gz
CRX091600 RNA-seq of swamp buffalo forelimb Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115990 RNA-seq of swamp buffalo forelimb File: CRR115990_f1.fq.gz
File: CRR115990_r2.fq.gz
CRX091599 RNA-seq of swamp buffalo hindlimb Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115989 RNA-seq of swamp buffalo hindlimb File: CRR115989_f1.fq.gz
File: CRR115989_r2.fq.gz
CRX091598 RNA-seq of swamp buffalo medulla Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115988 RNA-seq of swamp buffalo medulla File: CRR115988_f1.fq.gz
File: CRR115988_r2.fq.gz
CRX091597 RNA-seq of swamp buffalo brain brodmann area 25+11 Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115987 RNA-seq of swamp buffalo brain brodmann area 25+11 File: CRR115987_f1.fq.gz
File: CRR115987_r2.fq.gz
CRX091596 RNA-seq of swamp buffalo heart Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115986 RNA-seq of swamp buffalo heart File: CRR115986_f1.fq.gz
File: CRR115986_r2.fq.gz
CRX091595 RNA-seq of swamp buffalo cerebellum Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115985 RNA-seq of swamp buffalo cerebellum File: CRR115985_f1.fq.gz
File: CRR115985_r2.fq.gz
CRX091594 RNA-seq of swamp buffalo hypothalamus Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115984 RNA-seq of swamp buffalo hypothalamus File: CRR115984_f1.fq.gz
File: CRR115984_r2.fq.gz
CRX091593 RNA-seq of swamp buffalo brain brodmann area 43 Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115983 RNA-seq of swamp buffalo brain brodmann area 43 File: CRR115983_f1.fq.gz
File: CRR115983_r2.fq.gz
CRX091592 RNA-seq of swamp buffalo brain brodmann area 24+32 Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115982 RNA-seq of swamp buffalo brain brodmann area 24+32 File: CRR115982_f1.fq.gz
File: CRR115982_r2.fq.gz
CRX091591 RNA-seq of swamp buffalo brain brodmann area 21+22/41+42 Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115981 RNA-seq of swamp buffalo brain brodmann area 21+22/41+42 File: CRR115981_f1.fq.gz
File: CRR115981_r2.fq.gz
CRX091590 RNA-seq of swamp buffalo pineal Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115980 RNA-seq of swamp buffalo pineal File: CRR115980_f1.fq.gz
File: CRR115980_r2.fq.gz
CRX091589 RNA-seq of swamp buffalo brain brodmann area 7+20 Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115979 RNA-seq of swamp buffalo brain brodmann area 7+20 File: CRR115979_f1.fq.gz
File: CRR115979_r2.fq.gz
CRX091588 RNA-seq of swamp buffalo kidney Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115978 RNA-seq of swamp buffalo kidney File: CRR115978_f1.fq.gz
File: CRR115978_r2.fq.gz
CRX091587 RNA-seq of swamp buffalo brain brodmann area 35 Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115977 RNA-seq of swamp buffalo brain brodmann area 35 File: CRR115977_f1.fq.gz
File: CRR115977_r2.fq.gz
CRX091586 RNA-seq of swamp buffalo brain brodmann area 23+31 Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115976 RNA-seq of swamp buffalo brain brodmann area 23+31 File: CRR115976_f1.fq.gz
File: CRR115976_r2.fq.gz
CRX091585 RNA-seq of swamp buffalo tongue Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115975 RNA-seq of swamp buffalo tongue File: CRR115975_f1.fq.gz
File: CRR115975_r2.fq.gz
CRX091584 RNA-seq of swamp buffalo spleen Bubalus carabanensis Illumina HiSeq 2000 SAMC134151
Run accession Run alias Run data file information
CRR115974 RNA-seq of swamp buffalo spleen File: CRR115974_f1.fq.gz
File: CRR115974_r2.fq.gz
Submitter:Xier Luo (1595240820@qq.com)
Organization:University of Guangxi
Date submitted:2020-02-05