Experiment information
Accession CRX078164
Organism Homo sapiens
Title M238 BRAFi ATAC-seq
BioProject PRJCA002011
BioSample SAMC122135
Platform NextSeq CN500
Library
Library name Construction protocol Strategy Source Selection Layout
Transposition reactions were incubated at 37 °C for 30 min in an Eppendorf ThermoMixer with shaking at 1,000 r.p.m. Following purification, we amplified library fragments using PCR .Tagmented DNA was purified using the MinElute Reaction Cleanup Kit (Qiagen, 28204). After the library was amplified by PCR and subjected to paired-end 35 bp high-throughput sequencing on an Illumina NextSeq 500 Next Generation Sequencing platform. ATAC-seq GENOMIC other PAIRED
Processing Planned read length (bp) for mate 1: 35
Planned read length (bp) for mate 2: 35
Insert size (bp): 258
Release date2019-12-10
Run
Run accession Release date Run data file information
File nameFile size (MB)
CRR100905 2019-12-10 20180202_ATAC_2_KL5230_S14_R1_001.fastq.gz
20180202_ATAC_2_KL5230_S14_R2_001.fastq.gz
731.1
821.91
SubmitterBinbin Wang (1610790@tongji.edu.cn)
OrganizationsTongji University
Date submitted2019-12-10
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