CRA001872 Information
Title: Profiling rice microbiome using an improved 16S-seq method
BioProject: PRJCA001629 / CRP001029
Release date: 2020-01-04
Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX081455 16S amplicon sequencing of bulk soil microbiome sample V5leaf6 root metagenome Illumina HiSeq 2500 SAMC125260
CRS063915
Run accession Run alias Run data file information
CRR104415 V5leaf6 File: CRR104415_f1.fastq.gz
File: CRR104415_r2.fastq.gz
CRX081454 16S amplicon sequencing of bulk soil microbiome sample V5leaf5 root metagenome Illumina HiSeq 2500 SAMC125259
CRS063914
Run accession Run alias Run data file information
CRR104414 V5leaf5 File: CRR104414_f1.fastq.gz
File: CRR104414_r2.fastq.gz
CRX081453 16S amplicon sequencing of bulk soil microbiome sample V5leaf4 root metagenome Illumina HiSeq 2500 SAMC125258
CRS063913
Run accession Run alias Run data file information
CRR104413 V5leaf4 File: CRR104413_f1.fastq.gz
File: CRR104413_r2.fastq.gz
CRX081452 16S amplicon sequencing of bulk soil microbiome sample V5leaf3 root metagenome Illumina HiSeq 2500 SAMC125257
CRS063912
Run accession Run alias Run data file information
CRR104412 V5leaf3 File: CRR104412_f1.fastq.gz
File: CRR104412_r2.fastq.gz
CRX081451 16S amplicon sequencing of bulk soil microbiome sample V5leaf2 root metagenome Illumina HiSeq 2500 SAMC125256
CRS063911
Run accession Run alias Run data file information
CRR104411 V5leaf2 File: CRR104411_f1.fastq.gz
File: CRR104411_r2.fastq.gz
CRX081450 16S amplicon sequencing of bulk soil microbiome sample V5leaf1 root metagenome Illumina HiSeq 2500 SAMC125255
CRS063910
Run accession Run alias Run data file information
CRR104410 V5leaf1 File: CRR104410_f1.fastq.gz
File: CRR104410_r2.fastq.gz
CRX081449 16S amplicon sequencing of bulk soil microbiome sample V4BS6 root metagenome Illumina HiSeq 2500 SAMC125254
CRS063909
Run accession Run alias Run data file information
CRR104409 V4BS6 File: CRR104409_f1.fastq.gz
File: CRR104409_r2.fastq.gz
CRX081448 16S amplicon sequencing of bulk soil microbiome sample V4BS5 root metagenome Illumina HiSeq 2500 SAMC125253
CRS063908
Run accession Run alias Run data file information
CRR104408 V4BS5 File: CRR104408_f1.fastq.gz
File: CRR104408_r2.fastq.gz
CRX081447 16S amplicon sequencing of bulk soil microbiome sample V4BS4 root metagenome Illumina HiSeq 2500 SAMC125252
CRS063907
Run accession Run alias Run data file information
CRR104407 V4BS4 File: CRR104407_f1.fastq.gz
File: CRR104407_r2.fastq.gz
CRX081446 16S amplicon sequencing of bulk soil microbiome sample V4BS3 root metagenome Illumina HiSeq 2500 SAMC125251
CRS063906
Run accession Run alias Run data file information
CRR104406 V4BS3 File: CRR104406_f1.fastq.gz
File: CRR104406_r2.fastq.gz
CRX081445 16S amplicon sequencing of bulk soil microbiome sample V4BS2 root metagenome Illumina HiSeq 2500 SAMC125250
CRS063905
Run accession Run alias Run data file information
CRR104405 V4BS2 File: CRR104405_f1.fastq.gz
File: CRR104405_r2.fastq.gz
CRX081444 16S amplicon sequencing of bulk soil microbiome sample V4BS1 root metagenome Illumina HiSeq 2500 SAMC125249
CRS063904
Run accession Run alias Run data file information
CRR104404 V4BS1 File: CRR104404_f1.fastq.gz
File: CRR104404_r2.fastq.gz
CRX081443 16S amplicon sequencing of bulk soil microbiome sample V4leaf6 root metagenome Illumina HiSeq 2500 SAMC125248
CRS063903
Run accession Run alias Run data file information
CRR104403 V4leaf6 File: CRR104403_f1.fastq.gz
File: CRR104403_r2.fastq.gz
CRX081442 16S amplicon sequencing of bulk soil microbiome sample V4leaf5 root metagenome Illumina HiSeq 2500 SAMC125247
CRS063902
Run accession Run alias Run data file information
CRR104402 V4leaf5 File: CRR104402_f1.fastq.gz
File: CRR104402_r2.fastq.gz
CRX081441 16S amplicon sequencing of bulk soil microbiome sample V4leaf4 root metagenome Illumina HiSeq 2500 SAMC125246
CRS063901
Run accession Run alias Run data file information
CRR104401 V4leaf4 File: CRR104401_f1.fastq.gz
File: CRR104401_r2.fastq.gz
CRX081440 16S amplicon sequencing of bulk soil microbiome sample V4leaf3 root metagenome Illumina HiSeq 2500 SAMC125245
CRS063900
Run accession Run alias Run data file information
CRR104400 V4leaf3 File: CRR104400_f1.fastq.gz
File: CRR104400_r2.fastq.gz
CRX081439 16S amplicon sequencing of bulk soil microbiome sample V4leaf2 root metagenome Illumina HiSeq 2500 SAMC125244
CRS063899
Run accession Run alias Run data file information
CRR104399 V4leaf2 File: CRR104399_f1.fastq.gz
File: CRR104399_r2.fastq.gz
CRX081438 16S amplicon sequencing of bulk soil microbiome sample V4leaf1 root metagenome Illumina HiSeq 2500 SAMC125243
CRS063898
Run accession Run alias Run data file information
CRR104398 V4leaf1 File: CRR104398_f1.fastq.gz
File: CRR104398_r2.fastq.gz
CRX056491 16S amplicon sequencing of bulk soil microbiome sample Bs1196-6 root metagenome Illumina HiSeq 2500 SAMC088259
CRS046589
Run accession Run alias Run data file information
CRR062566 Bs1196-6 File: CRR062566_f1.fq.gz
File: CRR062566_r2.fq.gz
CRX056490 16S amplicon sequencing of bulk soil microbiome sample Bs1196-5 root metagenome Illumina HiSeq 2500 SAMC088258
CRS046588
Run accession Run alias Run data file information
CRR062565 Bs1196-5 File: CRR062565_f1.fq.gz
File: CRR062565_r2.fq.gz
Submitter:Lu yang Song (lyang.s@webmail.hzau.edu.cn)
Organizations:National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University
Date submitted:2019-08-03