CRA001858 Information
Title: Chromatin remodelers-mediated chromatin accessibility facilitates nascent-to-fetal hematopoietic stem and progenitor cell transition
BioProject: PRJCA001615 /
Release date: 2020-07-16
Files: 54
File size: 186.43 GB
Publication
Journal name
Blood
Year
2021
DOI
10.1182/blood.2020005219
PubMed ID
32756943

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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX055083 ChIP 3dpf Ncl rep2 Danio rerio Illumina NovaSeq 5000 SAMC086422
Run accession Run alias Run data file information
CRR061149 ChIP 3dpf Ncl rep2 File: CRR061149_f1.fastq.gz
File: CRR061149_r2.fastq.gz
CRX055082 ChIP 3dpf Ncl rep1 Danio rerio Illumina NovaSeq 5000 SAMC086421
Run accession Run alias Run data file information
CRR061147 ChIP 3dpf Ncl rep1 run1 File: CRR061147_f1.fastq.gz
File: CRR061147_r2.fastq.gz
CRR061148 ChIP 3dpf Ncl rep1 run2 File: CRR061148_f1.fastq.gz
File: CRR061148_r2.fastq.gz
CRX055081 ChIP 3dpf Smarca5 rep2 Danio rerio Illumina NovaSeq 5000 SAMC086420
Run accession Run alias Run data file information
CRR061146 ChIP 3dpf Smarca5 rep2 File: CRR061146_f1.fastq.gz
File: CRR061146_r2.fastq.gz
CRX055080 ChIP 3dpf Smarca5 rep1 Danio rerio Illumina NovaSeq 5000 SAMC086419
Run accession Run alias Run data file information
CRR061145 ChIP 3dpf Smarca5 rep1 File: CRR061145_f1.fastq.gz
File: CRR061145_r2.fastq.gz
CRX055079 ChIP 3dpf input rep2 Danio rerio Illumina NovaSeq 5000 SAMC086418
Run accession Run alias Run data file information
CRR061144 ChIP 3dpf input rep2 File: CRR061144_f1.fastq.gz
File: CRR061144_r2.fastq.gz
CRX055078 ChIP 3dpf input rep1 Danio rerio Illumina NovaSeq 5000 SAMC086417
Run accession Run alias Run data file information
CRR061143 ChIP 3dpf input rep1 File: CRR061143_f1.fastq.gz
File: CRR061143_r2.fastq.gz
CRX055077 RNA 3dpf mutant rep2 Danio rerio Illumina NovaSeq 5000 SAMC086416
Run accession Run alias Run data file information
CRR061142 RNA 3dpf mutant rep2 File: CRR061142_f1.fastq.gz
File: CRR061142_r2.fastq.gz
CRX055076 RNA 3dpf mutant rep1 Danio rerio Illumina NovaSeq 5000 SAMC086415
Run accession Run alias Run data file information
CRR061141 RNA 3dpf mutant rep1 File: CRR061141_f1.fastq.gz
File: CRR061141_r2.fastq.gz
CRX055075 RNA 3 dpf sibling rep2 Danio rerio Illumina NovaSeq 5000 SAMC086414
Run accession Run alias Run data file information
CRR061140 RNA 3 dpf sibling rep2 File: CRR061140_f1.fastq.gz
File: CRR061140_r2.fastq.gz
CRX055074 RNA 3 dpf sibling rep1 Danio rerio Illumina NovaSeq 5000 SAMC086413
Run accession Run alias Run data file information
CRR061139 RNA 3 dpf sibling rep1 File: CRR061139_f1.fastq.gz
File: CRR061139_r2.fastq.gz
CRX055073 RNA 3 dpf wt rep2 Danio rerio Illumina HiSeq X Ten SAMC086412
Run accession Run alias Run data file information
CRR061138 RNA 3 dpf wt rep2 File: CRR061138_f1.fastq.gz
File: CRR061138_r2.fastq.gz
CRX055072 RNA 3 dpf wt rep1 Danio rerio Illumina HiSeq X Ten SAMC086411
Run accession Run alias Run data file information
CRR061137 RNA 3 dpf wt rep1 File: CRR061137_f1.fastq.gz
File: CRR061137_r2.fastq.gz
CRX055071 RNA 36 hpf wt rep2 Danio rerio Illumina HiSeq X Ten SAMC086410
Run accession Run alias Run data file information
CRR061136 RNA 36 hpf wt rep2 File: CRR061136_f1.fastq.gz
File: CRR061136_r2.fastq.gz
CRX055070 RNA 36 hpf wt rep1 Danio rerio Illumina HiSeq X Ten SAMC086409
Run accession Run alias Run data file information
CRR061135 RNA 36 hpf wt rep1 File: CRR061135_f1.fastq.gz
File: CRR061135_r2.fastq.gz
CRX055069 ATAC 3 dpf mutant rep2 Danio rerio Illumina NovaSeq 5000 SAMC086408
Run accession Run alias Run data file information
CRR061133 ATAC 3 dpf mutant rep2 run1 File: CRR061133_f1.fastq.gz
File: CRR061133_r2.fastq.gz
CRR061134 ATAC 3 dpf mutant rep2 run2 File: CRR061134_f1.fastq.gz
File: CRR061134_r2.fastq.gz
CRX055068 ATAC 3 dpf mutant rep1 Danio rerio Illumina NovaSeq 5000 SAMC086407
Run accession Run alias Run data file information
CRR061131 ATAC 3 dpf mutant rep1 run1 File: CRR061131_f1.fastq.gz
File: CRR061131_r2.fastq.gz
CRR061132 ATAC 3 dpf mutant rep1 run2 File: CRR061132_f1.fastq.gz
File: CRR061132_r2.fastq.gz
CRX055067 ATAC 3 dpf siblings rep2 Danio rerio Illumina NovaSeq 5000 SAMC086406
Run accession Run alias Run data file information
CRR061130 ATAC 3 dpf siblings rep2 File: CRR061130_f1.fastq.gz
File: CRR061130_r2.fastq.gz
CRX055066 ATAC 3 dpf siblings rep1 Danio rerio Illumina NovaSeq 5000 SAMC086405
Run accession Run alias Run data file information
CRR061129 ATAC 3 dpf siblings rep1 File: CRR061129_f1.fastq.gz
File: CRR061129_r2.fastq.gz
CRX055065 ATAC 3 dpf wt rep3 Danio rerio Illumina NovaSeq 5000 SAMC086404
Run accession Run alias Run data file information
CRR061128 ATAC 3 dpf wt rep3 File: CRR061128_f1.fastq.gz
File: CRR061128_r2.fastq.gz
CRX055064 ATAC 3 dpf wt rep2 Danio rerio Illumina NovaSeq 5000 SAMC086403
Run accession Run alias Run data file information
CRR061127 ATAC 3 dpf wt rep2 File: CRR061127_f1.fastq.gz
File: CRR061127_r2.fastq.gz
Submitter:Wen Wang (1510781@tongji.edu.cn)
Organization:Tongji University
Date submitted:2019-07-30