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CRA001490 Information
Title: SSR sequence
BioProject: PRJCA001331 /
Release date: 2019-05-05
Files: 764
File size: 5.32 GB
Publication
Article title
Target SSR-Seq: A Novel SSR Genotyping Technology Associate With Perfect SSRs in Genetic Analysis of Cucumber Varieties
Journal name
Frontiers in Plant Science
Year
2019
DOI
10.3389/fpls.2019.00531
PubMed ID
31105728

Article title
A new SNP genotyping technology Target SNP-seq and its application in genetic analysis of cucumber varieties
Journal name
Scientific Reports
Year
2020
DOI
10.1038/s41598-020-62518-6
PubMed ID
32221398

Dataset Downlaod
MetaData:
CRA001490.xlsx
Files:
HTTPS：https://download.cncb.ac.cn/gsa/CRA001490
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX044955 Target region sequence in HG382 Cucumis sativus Illumina HiSeq X Ten SAMC064535
Run accession Run alias Run data file information
CRR049769 Target region sequence in HG382 File: CRR049769_f1.fq.gz
File: CRR049769_r2.fq.gz
CRX044954 Target region sequence in HG381 Cucumis sativus Illumina HiSeq X Ten SAMC064534
Run accession Run alias Run data file information
CRR049768 Target region sequence in HG381 File: CRR049768_f1.fq.gz
File: CRR049768_r2.fq.gz
CRX044953 Target region sequence in HG380 Cucumis sativus Illumina HiSeq X Ten SAMC064533
Run accession Run alias Run data file information
CRR049767 Target region sequence in HG380 File: CRR049767_f1.fq.gz
File: CRR049767_r2.fq.gz
CRX044952 Target region sequence in HG379 Cucumis sativus Illumina HiSeq X Ten SAMC064532
Run accession Run alias Run data file information
CRR049766 Target region sequence in HG379 File: CRR049766_f1.fq.gz
File: CRR049766_r2.fq.gz
CRX044951 Target region sequence in HG378 Cucumis sativus Illumina HiSeq X Ten SAMC064531
Run accession Run alias Run data file information
CRR049765 Target region sequence in HG378 File: CRR049765_f1.fq.gz
File: CRR049765_r2.fq.gz
CRX044950 Target region sequence in HG377 Cucumis sativus Illumina HiSeq X Ten SAMC064530
Run accession Run alias Run data file information
CRR049764 Target region sequence in HG377 File: CRR049764_f1.fq.gz
File: CRR049764_r2.fq.gz
CRX044949 Target region sequence in HG376 Cucumis sativus Illumina HiSeq X Ten SAMC064529
Run accession Run alias Run data file information
CRR049763 Target region sequence in HG376 File: CRR049763_f1.fq.gz
File: CRR049763_r2.fq.gz
CRX044948 Target region sequence in HG375 Cucumis sativus Illumina HiSeq X Ten SAMC064528
Run accession Run alias Run data file information
CRR049762 Target region sequence in HG375 File: CRR049762_f1.fq.gz
File: CRR049762_r2.fq.gz
CRX044947 Target region sequence in HG374 Cucumis sativus Illumina HiSeq X Ten SAMC064527
Run accession Run alias Run data file information
CRR049761 Target region sequence in HG374 File: CRR049761_f1.fq.gz
File: CRR049761_r2.fq.gz
CRX044946 Target region sequence in HG373 Cucumis sativus Illumina HiSeq X Ten SAMC064526
Run accession Run alias Run data file information
CRR049760 Target region sequence in HG373 File: CRR049760_f1.fq.gz
File: CRR049760_r2.fq.gz
CRX044945 Target region sequence in HG372 Cucumis sativus Illumina HiSeq X Ten SAMC064525
Run accession Run alias Run data file information
CRR049759 Target region sequence in HG372 File: CRR049759_f1.fq.gz
File: CRR049759_r2.fq.gz
CRX044944 Target region sequence in HG371 Cucumis sativus Illumina HiSeq X Ten SAMC064524
Run accession Run alias Run data file information
CRR049758 Target region sequence in HG371 File: CRR049758_f1.fq.gz
File: CRR049758_r2.fq.gz
CRX044943 Target region sequence in HG370 Cucumis sativus Illumina HiSeq X Ten SAMC064523
Run accession Run alias Run data file information
CRR049757 Target region sequence in HG370 File: CRR049757_f1.fq.gz
File: CRR049757_r2.fq.gz
CRX044942 Target region sequence in HG369 Cucumis sativus Illumina HiSeq X Ten SAMC064522
Run accession Run alias Run data file information
CRR049756 Target region sequence in HG369 File: CRR049756_f1.fq.gz
File: CRR049756_r2.fq.gz
CRX044941 Target region sequence in HG368 Cucumis sativus Illumina HiSeq X Ten SAMC064521
Run accession Run alias Run data file information
CRR049755 Target region sequence in HG368 File: CRR049755_f1.fq.gz
File: CRR049755_r2.fq.gz
CRX044940 Target region sequence in HG367 Cucumis sativus Illumina HiSeq X Ten SAMC064520
Run accession Run alias Run data file information
CRR049754 Target region sequence in HG367 File: CRR049754_f1.fq.gz
File: CRR049754_r2.fq.gz
CRX044939 Target region sequence in HG366 Cucumis sativus Illumina HiSeq X Ten SAMC064519
Run accession Run alias Run data file information
CRR049753 Target region sequence in HG366 File: CRR049753_f1.fq.gz
File: CRR049753_r2.fq.gz
CRX044938 Target region sequence in HG365 Cucumis sativus Illumina HiSeq X Ten SAMC064518
Run accession Run alias Run data file information
CRR049752 Target region sequence in HG365 File: CRR049752_f1.fq.gz
File: CRR049752_r2.fq.gz
CRX044937 Target region sequence in HG364 Cucumis sativus Illumina HiSeq X Ten SAMC064517
Run accession Run alias Run data file information
CRR049751 Target region sequence in HG364 File: CRR049751_f1.fq.gz
File: CRR049751_r2.fq.gz
CRX044936 Target region sequence in HG363 Cucumis sativus Illumina HiSeq X Ten SAMC064516
Run accession Run alias Run data file information
CRR049750 Target region sequence in HG363 File: CRR049750_f1.fq.gz
File: CRR049750_r2.fq.gz
Submitter:Yang Jingjing (yangjingjing@nercv.org)
Organization:Beijing Academy of Agriculture and Forestry Sciences
Date submitted:2019-03-16