Experiment information
Accession CRX074845
Organism Mus musculus
Title Early-2-cell_rep4
BioProject PRJCA001255
BioSample SAMC116608
Platform Illumina HiSeq X Ten
Library
Library name Construction protocol Strategy Source Selection Layout
The generation of Hi-C libraries with a low number of cells was optimized according to a previous protocol. For Hi-C library generation and sequencing, 100-500 cells were used per reaction, at least two replicates were performed for each stage. All isolated cells were washed three times in 0.5% bovine serum albumin in phosphate-buffered saline (BSA-PBS, Sigma) solution to avoid potential contamination. Hi-C GENOMIC unspecified PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Insert size (bp): 400
Release date2020-04-15
Run
Run accession Run data file information
File nameFile size (MB)
CRR087774 CRR087774_f1.fq.gz
CRR087774_r2.fq.gz
39,062.22
40,751.05
SubmitterQianshu Zhu (zhuqianshu@tongji.edu.cn)
OrganizationTongji University
Date submitted2019-11-27