Experiment information
Accession CRX032480
Organism Homo sapiens
Title HepG2 total RNA-seq
BioProject PRJCA001117
BioSample SAMC048015
Platform Illumina HiSeq 3000
Library
Library name Construction protocol Strategy Source Selection Layout
HepG2 total RNAseq library Total RNA were firstly extracted from HepG2 cells using the TransZol Up kit (#ET111, TransGen), the ribosomal RNAs (rRNAs) in the total RNA samples were depleted using the Epicentre Ribo-Zero rRNA Removal Kit (illumina, USA). Eventually, 1μg rRNA-depleted total RNAs were used for library preparation. The RNAs were fragmented into about 300bp for cDNA generation. The sequencing was performed on HiSeq 3000/4000 PE Cluster Kit with the read length equal to 150bp. RNA-Seq TRANSCRIPTOMIC unspecified PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Insert size (bp): 300
Release date2024-01-01
Run
Run accession Run data file information
File nameFile size (MB)
CRR036647 CRR036647_f1.fastq.gz
CRR036647_r2.fastq.gz
3,426.64
4,071.75
Submitterji zhiliang (appo@xmu.edu.cn)
OrganizationXiamen university
Date submitted2018-11-15
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