CRA001139 Information
Title: Dynamic landscapes and regulome of mRNA structure during zebrafish early embryogenesis
BioProject: PRJCA001046 / CRP000640
Release date: 2020-04-17
Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX030339 elavl1a morphant 6h rna-seq rep2 Danio rerio Illumina HiSeq 2000 SAMC046682
CRS023697
Run accession Run alias Run data file information
CRR033776 elavl1a_morphant_6h_rna-seq_rep2 File: CRR033776_f1.fastq.gz
File: CRR033776_r2.fastq.gz
CRX030338 elavl1a morphant 6h rna-seq rep1 Danio rerio Illumina HiSeq 2000 SAMC046681
CRS023696
Run accession Run alias Run data file information
CRR033775 elavl1a_morphant_6h_rna-seq_rep1 File: CRR033775_f1.fastq.gz
File: CRR033775_r2.fastq.gz
CRX030337 elavl1a morphant 4h rna-seq rep2 Danio rerio Illumina HiSeq 2000 SAMC046680
CRS023695
Run accession Run alias Run data file information
CRR033774 elavl1a_morphant_4h_rna-seq_rep2 File: CRR033774_f1.fastq.gz
File: CRR033774_r2.fastq.gz
CRX030336 elavl1a morphant 4h rna-seq rep1 Danio rerio Illumina HiSeq 2000 SAMC046679
CRS023694
Run accession Run alias Run data file information
CRR033773 elavl1a_morphant_4h_rna-seq_rep1 File: CRR033773_f1.fastq.gz
File: CRR033773_r2.fastq.gz
CRX030335 control 6h rna-seq rep2 Danio rerio Illumina HiSeq 2000 SAMC046678
CRS023693
Run accession Run alias Run data file information
CRR033772 control_6h_rna-seq_rep2 File: CRR033772_f1.fastq.gz
File: CRR033772_r2.fastq.gz
CRX030334 control 6h rna-seq rep1 Danio rerio Illumina HiSeq 2000 SAMC046677
CRS023692
Run accession Run alias Run data file information
CRR033771 control_6h_rna-seq_rep1 File: CRR033771_f1.fastq.gz
File: CRR033771_r2.fastq.gz
CRX030333 control 4h rna-seq rep2 Danio rerio Illumina HiSeq 2000 SAMC046676
CRS023691
Run accession Run alias Run data file information
CRR033770 control_4h_rna-seq_rep2 File: CRR033770_f1.fastq.gz
File: CRR033770_r2.fastq.gz
CRX030332 control 4h rna-seq rep1 Danio rerio Illumina HiSeq 2000 SAMC046675
CRS023690
Run accession Run alias Run data file information
CRR033769 control_4h_rna-seq_rep1 File: CRR033769_f1.fastq.gz
File: CRR033769_r2.fastq.gz
CRX030331 control 2h rna-seq rep2 Danio rerio Illumina HiSeq 2000 SAMC046674
CRS023689
Run accession Run alias Run data file information
CRR033768 control_2h_rna-seq_rep2 File: CRR033768_f1.fastq.gz
File: CRR033768_r2.fastq.gz
CRX030330 control 2h rna-seq rep1 Danio rerio Illumina HiSeq 2000 SAMC046673
CRS023688
Run accession Run alias Run data file information
CRR033767 control_2h_rna-seq_rep1 File: CRR033767_f1.fastq.gz
File: CRR033767_r2.fastq.gz
CRX030329 1-cell_RK-33_treated_NAIN3_rep2 Danio rerio Illumina HiSeq 2000 SAMC046672
CRS023687
Run accession Run alias Run data file information
CRR033766 1-cell_RK-33_treated_NAIN3_rep2 File: CRR033766.fastq.gz
CRX030328 1-cell_RK-33_treated_NAIN3_rep1 Danio rerio Illumina HiSeq 2000 SAMC046671
CRS023686
Run accession Run alias Run data file information
CRR033765 1-cell_RK-33_treated_NAIN3_rep1 File: CRR033765.fastq.gz
CRX030327 1-cell_RK-33_treated_DMSO_rep2 Danio rerio Illumina HiSeq 2000 SAMC046670
CRS023685
Run accession Run alias Run data file information
CRR033764 1-cell_RK-33_treated_DMSO_rep2 File: CRR033764.fastq.gz
CRX030326 1-cell_RK-33_treated_DMSO_rep1 Danio rerio Illumina HiSeq 2000 SAMC046669
CRS023684
Run accession Run alias Run data file information
CRR033763 1-cell_RK-33_treated_DMSO_rep1 File: CRR033763.fastq.gz
CRX030325 shield_NAIN3_rep2 Danio rerio Illumina HiSeq 2000 SAMC046668
CRS023683
Run accession Run alias Run data file information
CRR033762 shield_NAIN3_rep2 File: CRR033762.fastq.gz
CRX030324 shield_NAIN3_rep1 Danio rerio Illumina HiSeq 2000 SAMC046667
CRS023682
Run accession Run alias Run data file information
CRR033761 shield_NAIN3_rep1 File: CRR033761.fastq.gz
CRX030323 shield_DMSO_rep2 Danio rerio Illumina HiSeq 2000 SAMC046666
CRS023681
Run accession Run alias Run data file information
CRR033760 shield_DMSO_rep2 File: CRR033760.fastq.gz
CRX030322 shield_DMSO_rep1 Danio rerio Illumina HiSeq 2000 SAMC046665
CRS023680
Run accession Run alias Run data file information
CRR033759 shield_DMSO_rep1 File: CRR033759.fastq.gz
CRX030321 sphere_NAIN3_rep2 Danio rerio Illumina HiSeq 2000 SAMC046664
CRS023679
Run accession Run alias Run data file information
CRR033758 sphere_NAIN3_rep2 File: CRR033758.fastq.gz
CRX030320 sphere_NAIN3_rep1 Danio rerio Illumina HiSeq 2000 SAMC046663
CRS023678
Run accession Run alias Run data file information
CRR033757 sphere_NAIN3_rep1 File: CRR033757.fastq.gz
Submitter:sun baofa (sunbf@big.ac.cn)
Organizations:Beijing Institute of Genomics, Chinese Academy of Sciences
Date submitted:2018-09-27