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CRA000903 Information
Title: Genome re-sequencing of Populus tomentosa natural population
BioProject: PRJCA000830 /
Release date: 2021-04-09
Files: 606
File size: 2711.63 GB
Publication
Article title
Genetic architecture underlying the lignin biosynthesis pathway involves noncoding RNAs and transcription factors for growth and wood properties in Populus
Journal name
Plant Biotechnology Journal
Year
2019
DOI
10.1111/pbi.12978
PubMed ID
29947466

Article title
Time-specific and pleiotropic quantitative trait loci coordinately modulate stem growth in Populus
Journal name
Plant Biotechnology Journal
Year
2019
DOI
10.1111/pbi.13002
PubMed ID
30133117

Article title
Identification of a transcriptional regulatory module that reduces leaf temperature in poplar under heat stress
Journal name
Tree Physiology
Year
2020
DOI
10.1093/treephys/tpaa025
PubMed ID

Article title
Genetic Architecture Underlying the Metabolites of Chlorogenic Acid Biosynthesis in Populus tomentosa
Journal name
International Journal of Molecular Sciences
Year
2021
DOI
10.3390/ijms22052386
PubMed ID
33673666

Article title
Transposable Elements: Distribution, Polymorphism, and Climate Adaptation in Populus
Journal name
Frontiers in Plant Science
Year
2022
DOI
10.3389/fpls.2022.814718
PubMed ID
35178060

Article title
Multi-omics analysis provides insights into genetic architecture of flavonoid metabolites in Populus
Journal name
Industrial Crops and Products
Year
2021
DOI
10.1016/j.indcrop.2021.113612
PubMed ID

Article title
Pyramiding superior haplotypes and epistatic alleles to accelerate wood quality and yield improvement in poplar breeding
Journal name
Industrial Crops and Products
Year
2021
DOI
10.1016/j.indcrop.2021.113891
PubMed ID

Article title
Natural variation in the prolyl 4-hydroxylase gene PtoP4H9 contributes to perennial stem growth in Populus
Journal name
The Plant Cell
Year
2023
DOI
10.1093/plcell/koad212
PubMed ID
37522322

Dataset Downlaod
MetaData:
CRA000903.xlsx
Files:
HTTPS：https://download.cncb.ac.cn/gsa2/CRA000903
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX026454 Genome re-sequencing of P. tomentosa_sample 303 Populus tomentosa Illumina MiSeq SAMC029879
Run accession Run alias Run data file information
CRR029395 Genome re-sequencing data of P. tomentosa_sample 303 File: CRR029395_f1.fq.gz
File: CRR029395_r2.fq.gz
CRX026453 Genome re-sequencing of P. tomentosa_sample 302 Populus tomentosa Illumina MiSeq SAMC029878
Run accession Run alias Run data file information
CRR029394 Genome re-sequencing data of P. tomentosa_sample 302 File: CRR029394_f1.fq.gz
File: CRR029394_r2.fq.gz
CRX026452 Genome re-sequencing of P. tomentosa_sample 301 Populus tomentosa Illumina MiSeq SAMC029877
Run accession Run alias Run data file information
CRR029393 Genome re-sequencing data of P. tomentosa_sample 301 File: CRR029393_f1.fq.gz
File: CRR029393_r2.fq.gz
CRX026451 Genome re-sequencing of P. tomentosa_sample 300 Populus tomentosa Illumina MiSeq SAMC029876
Run accession Run alias Run data file information
CRR029392 Genome re-sequencing data of P. tomentosa_sample 300 File: CRR029392_f1.fq.gz
File: CRR029392_r2.fq.gz
CRX026450 Genome re-sequencing of P. tomentosa_sample 299 Populus tomentosa Illumina MiSeq SAMC029875
Run accession Run alias Run data file information
CRR029391 Genome re-sequencing data of P. tomentosa_sample 299 File: CRR029391_f1.fq.gz
File: CRR029391_r2.fq.gz
CRX026449 Genome re-sequencing of P. tomentosa_sample 298 Populus tomentosa Illumina MiSeq SAMC029874
Run accession Run alias Run data file information
CRR029390 Genome re-sequencing data of P. tomentosa_sample 298 File: CRR029390_f1.fq.gz
File: CRR029390_r2.fq.gz
CRX026448 Genome re-sequencing of P. tomentosa_sample 297 Populus tomentosa Illumina MiSeq SAMC029873
Run accession Run alias Run data file information
CRR029389 Genome re-sequencing data of P. tomentosa_sample 297 File: CRR029389_f1.fq.gz
File: CRR029389_r2.fq.gz
CRX026447 Genome re-sequencing of P. tomentosa_sample 296 Populus tomentosa Illumina MiSeq SAMC029872
Run accession Run alias Run data file information
CRR029388 Genome re-sequencing data of P. tomentosa_sample 296 File: CRR029388_f1.fq.gz
File: CRR029388_r2.fq.gz
CRX026446 Genome re-sequencing of P. tomentosa_sample 295 Populus tomentosa Illumina MiSeq SAMC029871
Run accession Run alias Run data file information
CRR029387 Genome re-sequencing data of P. tomentosa_sample 295 File: CRR029387_f1.fq.gz
File: CRR029387_r2.fq.gz
CRX026445 Genome re-sequencing of P. tomentosa_sample 294 Populus tomentosa Illumina MiSeq SAMC029870
Run accession Run alias Run data file information
CRR029386 Genome re-sequencing data of P. tomentosa_sample 294 File: CRR029386_f1.fq.gz
File: CRR029386_r2.fq.gz
CRX026444 Genome re-sequencing of P. tomentosa_sample 293 Populus tomentosa Illumina MiSeq SAMC029869
Run accession Run alias Run data file information
CRR029385 Genome re-sequencing data of P. tomentosa_sample 293 File: CRR029385_f1.fq.gz
File: CRR029385_r2.fq.gz
CRX026443 Genome re-sequencing of P. tomentosa_sample 292 Populus tomentosa Illumina MiSeq SAMC029868
Run accession Run alias Run data file information
CRR029384 Genome re-sequencing data of P. tomentosa_sample 292 File: CRR029384_f1.fq.gz
File: CRR029384_r2.fq.gz
CRX026442 Genome re-sequencing of P. tomentosa_sample 291 Populus tomentosa Illumina MiSeq SAMC029867
Run accession Run alias Run data file information
CRR029383 Genome re-sequencing data of P. tomentosa_sample 291 File: CRR029383_f1.fq.gz
File: CRR029383_r2.fq.gz
CRX026441 Genome re-sequencing of P. tomentosa_sample 290 Populus tomentosa Illumina MiSeq SAMC029866
Run accession Run alias Run data file information
CRR029382 Genome re-sequencing data of P. tomentosa_sample 290 File: CRR029382_f1.fq.gz
File: CRR029382_r2.fq.gz
CRX026440 Genome re-sequencing of P. tomentosa_sample 289 Populus tomentosa Illumina MiSeq SAMC029865
Run accession Run alias Run data file information
CRR029381 Genome re-sequencing data of P. tomentosa_sample 289 File: CRR029381_f1.fq.gz
File: CRR029381_r2.fq.gz
CRX026439 Genome re-sequencing of P. tomentosa_sample 288 Populus tomentosa Illumina MiSeq SAMC029864
Run accession Run alias Run data file information
CRR029380 Genome re-sequencing data of P. tomentosa_sample 288 File: CRR029380_f1.fq.gz
File: CRR029380_r2.fq.gz
CRX026438 Genome re-sequencing of P. tomentosa_sample 287 Populus tomentosa Illumina MiSeq SAMC029863
Run accession Run alias Run data file information
CRR029379 Genome re-sequencing data of P. tomentosa_sample 287 File: CRR029379_f1.fq.gz
File: CRR029379_r2.fq.gz
CRX026437 Genome re-sequencing of P. tomentosa_sample 286 Populus tomentosa Illumina MiSeq SAMC029862
Run accession Run alias Run data file information
CRR029378 Genome re-sequencing data of P. tomentosa_sample 286 File: CRR029378_f1.fq.gz
File: CRR029378_r2.fq.gz
CRX026436 Genome re-sequencing of P. tomentosa_sample 285 Populus tomentosa Illumina MiSeq SAMC029861
Run accession Run alias Run data file information
CRR029377 Genome re-sequencing data of P. tomentosa_sample 285 File: CRR029377_f1.fq.gz
File: CRR029377_r2.fq.gz
CRX026435 Genome re-sequencing of P. tomentosa_sample 284 Populus tomentosa Illumina MiSeq SAMC029860
Run accession Run alias Run data file information
CRR029376 Genome re-sequencing data of P. tomentosa_sample 284 File: CRR029376_f1.fq.gz
File: CRR029376_r2.fq.gz
Submitter:beibei chen (bbeichen2017@163.com)
Organization:Beijing Forestry University
Date submitted:2018-04-28