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CRA000872 Information
Title: 5hmC in cfDNA as sensitive and specific biomarker for human lung cancer
BioProject: PRJCA000816 /
Release date: 2018-07-20
Files: 266
File size: 154.62 GB
Publication
Article title
5-Hydroxymethylome in Circulating Cell-free DNA as A Potential Biomarker for Non-small-cell Lung Cancer
Journal name
Genomics, Proteomics & Bioinformatics
Year
2018
DOI
10.1016/j.gpb.2018.06.002
PubMed ID
30010036

Dataset Downlaod
MetaData:
CRA000872.xlsx
Files:
HTTPS：https://download.cncb.ac.cn/gsa3/CRA000872
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX025973 Lung_cancer_plasma_5hmC-Seal-Seq_66 Homo sapiens Illumina HiSeq 2500 SAMC027396
Run accession Run alias Run data file information
CRR028880 Lung_cancer_plasma_5hmC-Seal-Seq_66 File: CRR028880_f1.fastq.gz
File: CRR028880_r2.fastq.gz
CRX025972 Lung_cancer_plasma_5hmC-Seal-Seq_65 Homo sapiens Illumina HiSeq 2500 SAMC027395
Run accession Run alias Run data file information
CRR028879 Lung_cancer_plasma_5hmC-Seal-Seq_65 File: CRR028879_f1.fastq.gz
File: CRR028879_r2.fastq.gz
CRX025971 Lung_cancer_plasma_5hmC-Seal-Seq_64 Homo sapiens Illumina HiSeq 2500 SAMC027394
Run accession Run alias Run data file information
CRR028878 Lung_cancer_plasma_5hmC-Seal-Seq_64 File: CRR028878_f1.fastq.gz
File: CRR028878_r2.fastq.gz
CRX025970 Lung_cancer_plasma_5hmC-Seal-Seq_63 Homo sapiens Illumina HiSeq 2500 SAMC027393
Run accession Run alias Run data file information
CRR028877 Lung_cancer_plasma_5hmC-Seal-Seq_63 File: CRR028877_f1.fastq.gz
File: CRR028877_r2.fastq.gz
CRX025969 Lung_cancer_plasma_5hmC-Seal-Seq_62 Homo sapiens Illumina HiSeq 2500 SAMC027392
Run accession Run alias Run data file information
CRR028876 Lung_cancer_plasma_5hmC-Seal-Seq_62 File: CRR028876_f1.fastq.gz
File: CRR028876_r2.fastq.gz
CRX025968 Lung_cancer_plasma_5hmC-Seal-Seq_61 Homo sapiens Illumina HiSeq 2500 SAMC027391
Run accession Run alias Run data file information
CRR028875 Lung_cancer_plasma_5hmC-Seal-Seq_61 File: CRR028875_f1.fastq.gz
File: CRR028875_r2.fastq.gz
CRX025967 Lung_cancer_plasma_5hmC-Seal-Seq_60 Homo sapiens Illumina HiSeq 2500 SAMC027390
Run accession Run alias Run data file information
CRR028874 Lung_cancer_plasma_5hmC-Seal-Seq_60 File: CRR028874_f1.fastq.gz
File: CRR028874_r2.fastq.gz
CRX025966 Lung_cancer_plasma_5hmC-Seal-Seq_59 Homo sapiens Illumina HiSeq 2500 SAMC027389
Run accession Run alias Run data file information
CRR028873 Lung_cancer_plasma_5hmC-Seal-Seq_59 File: CRR028873_f1.fastq.gz
File: CRR028873_r2.fastq.gz
CRX025965 Lung_cancer_plasma_5hmC-Seal-Seq_58 Homo sapiens Illumina HiSeq 2500 SAMC027388
Run accession Run alias Run data file information
CRR028872 Lung_cancer_plasma_5hmC-Seal-Seq_58 File: CRR028872_f1.fastq.gz
File: CRR028872_r2.fastq.gz
CRX025964 Lung_cancer_plasma_5hmC-Seal-Seq_57 Homo sapiens Illumina HiSeq 2500 SAMC027387
Run accession Run alias Run data file information
CRR028871 Lung_cancer_plasma_5hmC-Seal-Seq_57 File: CRR028871_f1.fastq.gz
File: CRR028871_r2.fastq.gz
CRX025963 Lung_cancer_plasma_5hmC-Seal-Seq_56 Homo sapiens Illumina HiSeq 2500 SAMC027386
Run accession Run alias Run data file information
CRR028870 Lung_cancer_plasma_5hmC-Seal-Seq_56 File: CRR028870_f1.fastq.gz
File: CRR028870_r2.fastq.gz
CRX025962 Lung_cancer_plasma_5hmC-Seal-Seq_55 Homo sapiens Illumina HiSeq 2500 SAMC027385
Run accession Run alias Run data file information
CRR028869 Lung_cancer_plasma_5hmC-Seal-Seq_55 File: CRR028869_f1.fastq.gz
File: CRR028869_r2.fastq.gz
CRX025961 Lung_cancer_plasma_5hmC-Seal-Seq_54 Homo sapiens Illumina HiSeq 2500 SAMC027384
Run accession Run alias Run data file information
CRR028868 Lung_cancer_plasma_5hmC-Seal-Seq_54 File: CRR028868_f1.fastq.gz
File: CRR028868_r2.fastq.gz
CRX025960 Lung_cancer_plasma_5hmC-Seal-Seq_53 Homo sapiens Illumina HiSeq 2500 SAMC027383
Run accession Run alias Run data file information
CRR028867 Lung_cancer_plasma_5hmC-Seal-Seq_53 File: CRR028867_f1.fastq.gz
File: CRR028867_r2.fastq.gz
CRX025959 Lung_cancer_plasma_5hmC-Seal-Seq_52 Homo sapiens Illumina HiSeq 2500 SAMC027382
Run accession Run alias Run data file information
CRR028866 Lung_cancer_plasma_5hmC-Seal-Seq_52 File: CRR028866_f1.fastq.gz
File: CRR028866_r2.fastq.gz
CRX025958 Lung_cancer_plasma_5hmC-Seal-Seq_51 Homo sapiens Illumina HiSeq 2500 SAMC027381
Run accession Run alias Run data file information
CRR028865 Lung_cancer_plasma_5hmC-Seal-Seq_51 File: CRR028865_f1.fastq.gz
File: CRR028865_r2.fastq.gz
CRX025957 Lung_cancer_plasma_5hmC-Seal-Seq_50 Homo sapiens Illumina HiSeq 2500 SAMC027380
Run accession Run alias Run data file information
CRR028864 Lung_cancer_plasma_5hmC-Seal-Seq_50 File: CRR028864_f1.fastq.gz
File: CRR028864_r2.fastq.gz
CRX025956 Lung_cancer_plasma_5hmC-Seal-Seq_49 Homo sapiens Illumina HiSeq 2500 SAMC027379
Run accession Run alias Run data file information
CRR028863 Lung_cancer_plasma_5hmC-Seal-Seq_49 File: CRR028863_f1.fastq.gz
File: CRR028863_r2.fastq.gz
CRX025955 Lung_cancer_plasma_5hmC-Seal-Seq_48 Homo sapiens Illumina HiSeq 2500 SAMC027378
Run accession Run alias Run data file information
CRR028862 Lung_cancer_plasma_5hmC-Seal-Seq_48 File: CRR028862_f1.fastq.gz
File: CRR028862_r2.fastq.gz
CRX025954 Lung_cancer_plasma_5hmC-Seal-Seq_47 Homo sapiens Illumina HiSeq 2500 SAMC027377
Run accession Run alias Run data file information
CRR028861 Lung_cancer_plasma_5hmC-Seal-Seq_47 File: CRR028861_f1.fastq.gz
File: CRR028861_r2.fastq.gz
Submitter:sun baofa (sunbf@big.ac.cn)
Organization:Beijing Institute of Genomics, Chinese Academy of Sciences
Date submitted:2018-04-05