Experiment information
Accession CRX019684
Organism Pseudomonadota
Title start experiment_rep2
BioProject PRJCA000532
BioSample SAMC016304
Platform Illumina MiSeq
Library
Library name Construction protocol Strategy Source Selection Layout
All amplicons per time point and replicate were pooled on a mass basis to yield 18 amplicon pools in total: 16S rRNA : narG : napA : nrfA : nirS : nirK = 46 : 15 : 21 : 10 : 8. Adaptamers including barcodes were ligated to amplicon pools for sequencing library generation according to standard protocols prior to paired-end sequencing on a Illumina MiSeq platform utilizing V2 chemistry (2 x 250 bp). RNA-Seq TRANSCRIPTOMIC RT-PCR PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 50
Release date2019-02-09
Run
Run accession Run data file information
File nameFile size (MB)
CRR021441 CRR021441_f1.fastq.gz
CRR021441_r2.fastq.gz
4.81
6.22
CRR021442 CRR021442_f1.fastq.gz
CRR021442_r2.fastq.gz
5.51
4.05
CRR021443 CRR021443_f1.fastq.gz
CRR021443_r2.fastq.gz
2.63
3.14
CRR021444 CRR021444_f1.fastq.gz
CRR021444_r2.fastq.gz
3.19
2.78
CRR021445 CRR021445_f1.fastq.gz
CRR021445_r2.fastq.gz
0.64
0.9
CRR021446 CRR021446_f1.fastq.gz
CRR021446_r2.fastq.gz
1.2
0.86
CRR021447 CRR021447_f1.fastq.gz
CRR021447_r2.fastq.gz
1.2
1.42
CRR021448 CRR021448_f1.fastq.gz
CRR021448_r2.fastq.gz
1.55
1.31
CRR021449 CRR021449_f1.fastq.gz
CRR021449_r2.fastq.gz
3.43
4.76
CRR021450 CRR021450_f1.fastq.gz
CRR021450_r2.fastq.gz
5.12
3.87
CRR021451 CRR021451_f1.fastq.gz
CRR021451_r2.fastq.gz
0.05
0.08
CRR021452 CRR021452_f1.fastq.gz
CRR021452_r2.fastq.gz
0.07
0.05
SubmitterDianming Wu (dmwu@geo.ecnu.edu.cn)
OrganizationEast China Normal University
Date submitted2017-09-01