Database Commons

a catalog of biological databases

e.g., animal; RNA; Methylation; China

Database information

Panorama Public Database (Panorama Public Database)

General information

Description: Panorama Public Database is a repository of Skyline documents supporting published results. The Panorama web application facilitates viewing, sharing, and disseminating results contained in Skyline documents via a web-browser. This makes Panorama ideal for sharing targeted, quantitative results contained in Skyline documents with collaborators, reviewers, and the larger proteomics community
Year founded: 2018
Last update:
Version:
Accessibility:
Manual:
Accessible
Real time : Checking...
Country/Region: United States
Data type:
Data object:
NA
Database category:
Major organism:
NA
Keywords:

Contact information

University/Institution: University of Washington
Address: University of Washington, Seattle, Washington 98195, USA
City:
Province/State:
Country/Region: United States
Contact name (PI/Team): Brendan MacLean
Contact email (PI/Helpdesk): brendanx@uw.edu

Related Database

Record metadata

Created on: 2019-10-28
Curated by:
Dong Zou [2019-12-26]
Ghulam Abbas [2019-11-06]
Shoaib Saleem [2019-10-28]

Ranking

All databases:
1168/4549 (74.346%)
Structure:
141/615 (77.236%)
1168
Total Rank
11
Citations
5.5
z-index

Community reviews

Not Rated
Data quality & quantity:
Content organization & presentation
System accessibility & reliability:

Word cloud

Publications

29487113
Panorama Public: A Public Repository for Quantitative Data Sets Processed in Skyline. [PMID: 29487113]
Sharma V, Eckels J, Schilling B, Ludwig C, Jaffe JD, MacCoss MJ, MacLean B.

To address the growing need for a centralized, community resource of published results processed with Skyline, and to provide reviewers and readers immediate visual access to the data behind published conclusions, we present Panorama Public (https://panoramaweb.org/public.url), a repository of Skyline documents supporting published results. Panorama Public is built on Panorama, an open source data management system for mass spectrometry data processed with the Skyline targeted mass spectrometry environment. The Panorama web application facilitates viewing, sharing, and disseminating results contained in Skyline documents via a web-browser. Skyline users can easily upload their documents to a Panorama server and allow other researchers to explore uploaded results in the Panorama web-interface through a variety of familiar summary graphs as well as annotated views of the chromatographic peaks processed with Skyline. This makes Panorama ideal for sharing targeted, quantitative results contained in Skyline documents with collaborators, reviewers, and the larger proteomics community. The Panorama Public repository employs the full data visualization capabilities of Panorama which facilitates sharing results with reviewers during manuscript review.

Mol Cell Proteomics. 2018:17(6) | 11 Citations (from Europe PMC, 2020-05-30)