Gene Symbol: EGFR

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Sample ID Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
TCGA-DU-5852-01A LGG chr7 55154017 55154017 C T p.R252C missense_variant PASS 0.227777778
TCGA-DU-7013-01A LGG chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.961159063
TCGA-QH-A6XC-01A LGG chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.914264597
TCGA-KT-A7W1-01A LGG chr7 55173984 55173984 G A p.E709K missense_variant PASS 0.202738684
TCGA-S9-A7R2-01A LGG chr7 55142382 55142382 T G p.L62R missense_variant PASS 0.24025974
TCGA-DU-6392-01A LGG chr7 55157736 55157736 C T p.R427R synonymous_variant PASS 0.25862069
TCGA-DU-6392-01A LGG chr7 55165395 55165395 C T p.A613V missense_variant PASS 0.166666667
TCGA-DU-6392-01A LGG chr7 55170453 55170453 C T intron_variant PASS 0.205479452
TCGA-DU-7012-01A LGG chr7 55154030 55154030 A G p.D256G missense_variant PASS 0.398058252
TCGA-DU-A5TT-01A LGG chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.467741935
TCGA-S9-A6WN-01A LGG chr7 55192812 55192812 A G p.Y891C missense_variant PASS 0.209677419
TCGA-FG-A4MW-01A LGG chr7 55155874 55155874 G T p.G312W missense_variant PASS 0.902660407
TCGA-HT-A61C-01A LGG chr7 55154050 55154050 A C p.T263P missense_variant PASS 0.237179487
TCGA-E1-A7YQ-01A LGG chr7 55173057 55173057 G A p.G665D missense_variant PASS 0.822894168
TCGA-TM-A7C3-01A LGG chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.702681388
TCGA-DU-7292-01A LGG chr7 55154018 55154018 G C p.R252P missense_variant PASS 0.793823797
TCGA-FG-A70Z-01A LGG chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.876433121
TCGA-FG-A70Z-01A LGG chr7 55205411 55205411 C T p.Q1143* stop_gained PASS 0.86068477
TCGA-DU-8158-01A LGG chr7 55143315 55143315 A T p.E84V missense_variant PASS 0.261363636
TCGA-HT-A5RC-01A LGG chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.43012884
TCGA-E1-A7Z2-01A LGG chr7 55142382 55142382 T G p.L62R missense_variant PASS 0.201877934
TCGA-FG-A87Q-01A LGG chr7 55154051 55154051 C T p.T263I missense_variant PASS 0.401315789
TCGA-FG-A4MU-01B LGG chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.959382616
TCGA-S9-A7IX-01A LGG chr7 55142382 55142382 T G p.L62R missense_variant PASS 0.945533769
TCGA-DU-7006-01A LGG chr7 55154018 55154018 G C p.R252P missense_variant PASS 0.129032258
TCGA-HT-8107-01A LGG chr7 55143387 55143387 G A p.R108K missense_variant PASS 0.141891892
TCGA-VM-A8CD-01A LGG chr7 55165304 55165304 G T p.A583S missense_variant PASS 0.169014085
TCGA-VM-A8CD-01A LGG chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.227272727
TCGA-DU-A7TD-01A LGG chr7 55154090 55154090 A T p.Q276L missense_variant PASS 0.963956412
TCGA-FG-6692-01A LGG chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.950884956
TCGA-HT-8110-01A LGG chr7 55143387 55143387 G A p.R108K missense_variant PASS 0.942611191
TCGA-E1-A7YD-01A LGG chr7 55155911 55155911 G T p.R324L missense_variant PASS 0.919324578
TCGA-DU-8162-01A LGG chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.571895425
TCGA-QH-A6CX-01A LGG chr7 55155911 55155911 G T p.R324L missense_variant PASS 0.849593496
TCGA-12-0691-01A GBM chr7 55154030 55154030 A G p.D256G missense_variant PASS 0.293478261
TCGA-19-2621-01B GBM chr7 55165428 55165428 G T p.C624F missense_variant PASS 0.95
TCGA-06-1804-01A GBM chr7 55154029 55154029 G T p.D256Y missense_variant PASS 0.142857143
TCGA-06-0881-01A GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.178137652
TCGA-06-0237-01A GBM chr7 55142382 55142382 T G p.L62R missense_variant PASS 0.842235004
TCGA-06-0154-01A GBM chr7 55152581 55152581 C T p.R222C missense_variant PASS 0.834756404
TCGA-32-2632-01A GBM chr7 55142382 55142382 T G p.L62R missense_variant PASS 0.957686127
TCGA-14-2554-01A GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.311931985
TCGA-14-1395-01B GBM chr7 55152602 55152602 A T p.S229C missense_variant PASS 0.773506059
TCGA-OX-A56R-01A GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.444444444
TCGA-12-0670-01B GBM chr7 55154050 55154050 A C p.T263P missense_variant PASS 0.700376884
TCGA-15-0742-01A GBM chr7 55171201 55171201 G A p.C636Y missense_variant PASS 0.955967078
TCGA-27-2528-01A GBM chr7 55152581 55152581 C T p.R222C missense_variant PASS 0.811105063
TCGA-06-0155-01B GBM chr7 55155850 55155850 C T p.H304Y missense_variant PASS 0.22907489
TCGA-14-0786-01B GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.834689868
TCGA-27-1831-01A GBM chr7 55143387 55143387 G A p.R108K missense_variant PASS 0.425075612
TCGA-14-1827-01A GBM chr7 55143331 55143331 C T p.V89V synonymous_variant PASS 0.975328947
TCGA-14-1827-01A GBM chr7 55143432 55143432 C T p.S123F missense_variant PASS 0.97225573
TCGA-27-1838-01A GBM chr7 55154129 55154129 C A p.A289D missense_variant PASS 0.930765704
TCGA-14-1456-01B GBM chr7 55151328 55151328 C T p.S198S synonymous_variant PASS 0.232067511
TCGA-14-1456-01B GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.238461538
TCGA-76-6282-01A GBM chr7 55163813 55163813 G C p.C571S missense_variant PASS 0.739383362
TCGA-81-5910-01A GBM chr7 55154017 55154017 C T p.R252C missense_variant PASS 0.104663212
TCGA-19-1388-01A GBM chr7 55165381 55165381 G C p.W608C missense_variant PASS 0.279620853
TCGA-06-0876-01A GBM chr7 55143387 55143387 G A p.R108K missense_variant PASS 0.316763006
TCGA-06-0876-01A GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.318196457
TCGA-02-2485-01A GBM chr7 55154129 55154129 C A p.A289D missense_variant PASS 0.936087799
TCGA-06-0749-01A GBM chr7 55154128 55154128 G A p.A289T missense_variant PASS 0.25
TCGA-06-0749-01A GBM chr7 55181329 55181329 G A p.V774M missense_variant PASS 0.125490196
TCGA-06-2565-01A GBM chr7 55143387 55143387 G A p.R108K missense_variant PASS 0.941371016
TCGA-26-5139-01A GBM chr7 55171177 55171177 G T p.C628F missense_variant;splice_region PASS 0.822971049
TCGA-06-5416-01A GBM chr7 55173086 55173086 C T p.R675W missense_variant PASS 0.451456311
TCGA-06-5416-01A GBM chr7 55173093 55173093 G A p.R677H missense_variant PASS 0.415
TCGA-06-5416-01A GBM chr7 55174796 55174796 G A p.P753P synonymous_variant PASS 0.215384615
TCGA-06-5416-01A GBM chr7 55181259 55181259 G A intron_variant PASS 0.249070632
TCGA-06-5416-01A GBM chr7 55202557 55202557 G A p.R1068Q missense_variant PASS 0.212121212
TCGA-28-5213-01A GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.186046512
TCGA-19-5956-01A GBM chr7 55146642 55146642 C A p.P154H missense_variant PASS 0.2
TCGA-12-0619-01A GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.135431301
TCGA-28-1752-01A GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.181818182
TCGA-28-1752-01A GBM chr7 55181329 55181329 G A p.V774M missense_variant PASS 0.358003442
TCGA-12-3650-01A GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.878325942
TCGA-19-1789-01A GBM chr7 55155940 55155940 C T p.R334C missense_variant PASS 0.753869969
TCGA-14-0790-01B GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.933501078
TCGA-14-1034-01A GBM chr7 55142384 55142384 G A p.G63R missense_variant PASS 0.172161172
TCGA-06-5856-01A GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.548453608
TCGA-06-2563-01A GBM chr7 55154017 55154017 C T p.R252C missense_variant PASS 0.949064863
TCGA-81-5911-01A GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.711598746
TCGA-4W-AA9T-01A GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.876080692
TCGA-02-0003-01A GBM chr7 55165416 55165416 G A p.C620Y missense_variant PASS 0.445238095
TCGA-28-1749-01A GBM chr7 55156614 55156614 C T p.T363I missense_variant PASS 0.233980324
TCGA-06-0157-01A GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.927761445
TCGA-28-5207-01A GBM chr7 55154128 55154128 G A p.A289T missense_variant PASS 0.41011236
TCGA-76-4927-01A GBM chr7 55152581 55152581 C T p.R222C missense_variant PASS 0.527607362
TCGA-76-4931-01A GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.953067382
TCGA-32-1970-01A GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.540617577
TCGA-06-0747-01A GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.960923623
TCGA-06-0747-01A GBM chr7 55154130 55154130 C T p.A289A synonymous_variant PASS 0.962464589
TCGA-12-0657-01A GBM chr7 55172997 55172997 C G p.S645C missense_variant PASS 0.120833333
TCGA-12-0657-01A GBM chr7 55191831 55191831 T A p.L861Q missense_variant PASS 0.457051962
TCGA-14-1829-01A GBM chr7 55156614 55156614 C T p.T363I missense_variant PASS 0.966086957
TCGA-19-2620-01A GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.123084069
TCGA-28-5209-01A GBM chr7 55165350 55165350 G C p.G598A missense_variant PASS 0.123917388
TCGA-RR-A6KC-01A GBM chr7 55154017 55154017 C T p.R252C missense_variant PASS 0.413014608
TCGA-76-6191-01A GBM chr7 55165417 55165417 C G p.C620W missense_variant PASS 0.22972973
TCGA-06-0125-01A GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.737003913
TCGA-28-1745-01B GBM chr7 55201273 55201273 T A p.V1011E missense_variant PASS 0.190721649
TCGA-32-1982-01A GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.845905172
TCGA-06-2561-01A GBM chr7 55146626 55146626 C T p.R149W missense_variant PASS 0.098901099
TCGA-14-1455-01A GBM chr7 55156614 55156614 C T p.T363I missense_variant PASS 0.208333333
TCGA-16-1045-01B GBM chr7 55154050 55154050 A C p.T263P missense_variant PASS 0.912328767
TCGA-06-0750-01A GBM chr7 55154128 55154128 G A p.A289T missense_variant PASS 0.134387352
TCGA-06-0750-01A GBM chr7 55154129 55154129 C A p.A289D missense_variant PASS 0.168124006
TCGA-06-0750-01A GBM chr7 55165344 55165344 C G p.P596R missense_variant PASS 0.234866828
TCGA-06-6695-01A GBM chr7 55181324 55181325 - CCACGT p.H773_V774dup inframe_insertion PASS 0.106060606
TCGA-06-0743-01A GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.252557545
TCGA-76-6656-01A GBM chr7 55152636 55152636 G A p.C240Y missense_variant PASS 0.190205371
TCGA-28-1747-01C GBM chr7 55155850 55155850 C T p.H304Y missense_variant PASS 0.228169014
TCGA-28-1747-01C GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.119875454
TCGA-12-0829-01A GBM chr7 55172997 55172997 C G p.S645C missense_variant PASS 0.765751212
TCGA-06-0185-01A GBM chr7 55173014 55173014 G A p.V651M missense_variant PASS 0.244080678
TCGA-26-1439-01A GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.510875787
TCGA-12-0616-01A GBM chr7 55165350 55165350 G T p.G598V missense_variant PASS 0.309570313
TCGA-16-1048-01B GBM chr7 55154023 55154023 T A p.F254I missense_variant PASS 0.943192065
TCGA-76-4926-01B GBM chr7 55168546 55168546 G C intron_variant PASS 0.156361282
TCGA-02-2466-01A GBM chr7 55154129 55154129 C T p.A289V missense_variant PASS 0.23255814
TCGA-12-0656-01A GBM chr7 55154129 55154129 C A p.A289D missense_variant PASS 0.221719457
TCGA-28-1757-01A GBM chr7 55152581 55152581 C T p.R222C missense_variant PASS 0.978303748
TCGA-12-1600-01A GBM chr7 55181329 55181329 G A p.V774M missense_variant PASS 0.485302939