| Accession |
SAMC308103 |
| Sample name |
C3-8 |
| Title |
16S rRNA sequencing of water microbiota: control sample |
| Sample type |
Environmental/Metagenome Genomic Sequences MIMS.me -- water |
| Organism |
Bacteria |
| Description |
P. furukawaii ZS1 was cultured and added to the three treatment tanks every day during the experiment. An equal volume of sterile water was added to the three control tanks. Genomic DNA of the water microbiota was extracted from the filter membranes using a PowerSoil DNA isolation kit. The V4-V5 hypervariable region of the prokaryotic 16S rRNA gene was amplified using the universal primer pair 515F and 909R. |
| Attributes |
| Collection date | 2018-07-30 |
|---|
| environment biome | water |
|---|
| environment feature | pond |
|---|
| environment material | pond water |
|---|
| Geographic location | China: Guangzhou |
|---|
| Latitude and longitude | 22.89 N 113.44 E |
|---|
| depth | 10 cm |
|---|
| alkalinity | missing |
|---|
| alkyl diethers | |
|---|
| altitude | |
|---|
| aminopeptidase activity | |
|---|
| ammonium | |
|---|
| atmospheric data | |
|---|
| bacterial production | |
|---|
| bacterial respiration | |
|---|
| bacterial carbon production | |
|---|
| biomass | |
|---|
| bishomohopanol | |
|---|
| bromide | |
|---|
| calcium | |
|---|
| carbon/nitrogen ratio | |
|---|
| chemical administration | |
|---|
| chloride | |
|---|
| chlorophyll | |
|---|
| conductivity | |
|---|
| density | |
|---|
| diether lipids | |
|---|
| dissolved carbon dioxide | |
|---|
| dissolved hydrogen | |
|---|
| dissolved inorganic carbon | |
|---|
| dissolved inorganic nitrogen | |
|---|
| dissolved inorganic phosphorus | |
|---|
| dissolved organic carbon | |
|---|
| dissolved organic nitrogen | |
|---|
| dissolved oxygen | |
|---|
| downward PAR | |
|---|
| elevation | |
|---|
| fluorescence | |
|---|
| glucosidase activity | |
|---|
| light intensity | |
|---|
| magnesium | |
|---|
| mean friction velocity | |
|---|
| mean peak friction velocity | |
|---|
| miscellaneous parameter | |
|---|
| n alkanes | |
|---|
| nitrate | |
|---|
| nitrite | |
|---|
| nitrogen | |
|---|
| organic carbon | |
|---|
| organic matter | |
|---|
| organic nitrogen | |
|---|
| organism count | |
|---|
| oxygenation status of sample | |
|---|
| particulate organic carbon | |
|---|
| particulate organic nitrogen | |
|---|
| perturbation | |
|---|
| petroleum hydrocarbon | |
|---|
| phaeopigments | |
|---|
| phosphate | |
|---|
| phospholipid fatty acid | |
|---|
| photon flux | |
|---|
| potassium | |
|---|
| pressure | |
|---|
| primary production | |
|---|
| redox potential | |
|---|
| sample salinity | |
|---|
| sample storage duration | |
|---|
| sample storage location | |
|---|
| sample storage temperature | |
|---|
| silicate | |
|---|
| sodium | |
|---|
| soluble reactive phosphorus | |
|---|
| sulfate | |
|---|
| sulfide | |
|---|
| suspended particulate matter | |
|---|
| temperature | |
|---|
| tidal stage | |
|---|
| total depth of water column | |
|---|
| total dissolved nitrogen | |
|---|
| total inorganic nitrogen | |
|---|
| total nitrogen | |
|---|
| total particulate carbon | |
|---|
| total phosphorus | |
|---|
| water current | |
|---|
| Reference for biomaterial | |
|---|
| Relationship to oxygen | |
|---|
| Sample collection device or method | |
|---|
| Sample material processing | |
|---|
| Sample size | |
|---|
| sample volume or weight for DNA extraction | |
|---|
| source material identifiers | |
|---|
| Isolation source | |
|---|
| Custom Attributes | |
|---|
|
| Release date |
2021-01-11 |
| BioProject Accession |
PRJCA004236 |
| Submitter |
Jiajia Ni (nijiajia2005@126.com)
|
| Organization |
Guangdong Meilikang Bio-Science, Ltd., China |
| Submission date |
2021-01-11 |
