Accession SAMC296967
Sample name SCD1061
Title SCD1061
Sample type Clinical or host-associated pathogen
Organism Norovirus
Description Next-generation sequencing of Norovirus positive samples from Shanghai Customs District China in 2018
Attributes
Isolate SCD1061
Strain norovirus
Collected by Shanghai Customs District, China
Collection date 2018-02-18
Geographic location China: Shanghai
Host Homo sapiens
Host disease diarrhea
Isolation source clinical samples;Thailand
Latitude and longitude 31.0 N 121.0 E
Culture collection Shanghai Customs District, China
genotype GI.5[P12] ,GI.7[P7] ,GII.8[P8] ,GIX.1[GII.P15]
Host age 36 year(s)
Host description Inbound passengers from Thailand
Host disease stage
Host health state
Host sex male
Host subject id
Host tissue sampled
Passage history
Pathotype
Serotype
Serovar
Specimen voucher
Subgroup
Subtype
Release date 2021-01-01
BioProject Accession PRJCA004050
Submitter Danlei  Liu  (liudanlei@163.com)
Organization Shanghai jiaotong university
Submission date 2020-12-21

Sample Data

Resource name Description
GSA (1) -
CRA003648 Surveillance and whole genome sequencing of Human Norovirus and other Foodborne viruses from inbound passengers monitored by Shanghai Customs China during 2018