| Accession |
SAMC253469 |
| Sample name |
YS-hg-1 |
| Title |
metagenome of bulk soil |
| Sample type |
Environmental/Metagenome Genomic Sequences MIMS.me -- soil |
| Organism |
soil metagenome |
| Description |
wheat rhizosphere and bulk soil microbiome |
| Attributes |
| Collection date | 2019-04-26 |
|---|
| environment biome | rhizosphere environment [ENVO: 01000999] |
|---|
| environment feature | bulk soil [ENVO: 00005802] |
|---|
| environment material | soil [ENVO: 00001998] |
|---|
| Geographic location | China: Shaanxi, Yongshou |
|---|
| Latitude and longitude | 34.74 N 108.20 E |
|---|
| depth | 0-10 cm |
|---|
| elevation | 972 m |
|---|
| agrochemical additions | |
|---|
| aluminium saturation | |
|---|
| aluminium saturation method | |
|---|
| altitude | |
|---|
| annual and seasonal precipitation | 513 mm |
|---|
| annual and seasonal temperature | 10.5 |
|---|
| crop rotation | winter wheat - summer fallow |
|---|
| current land use | |
|---|
| current vegetation | winter wheat |
|---|
| current vegetation method | farmland |
|---|
| drainage classification | well |
|---|
| extreme event | |
|---|
| extreme salinity | |
|---|
| FAO classification | |
|---|
| fire | |
|---|
| flooding | |
|---|
| heavy metals | |
|---|
| heavy metals method | |
|---|
| horizon | O horizon |
|---|
| horizon method | |
|---|
| links to additional analysis | |
|---|
| link to classification information | |
|---|
| link to climate information | |
|---|
| local classification | |
|---|
| local classification method | |
|---|
| microbial biomass | |
|---|
| microbial biomass method | |
|---|
| miscellaneous parameter | |
|---|
| pH | 8.4 |
|---|
| pH method | |
|---|
| pooling of DNA extracts | |
|---|
| previous land use | winter wheat - summer fallow |
|---|
| previous land use method | farmland |
|---|
| profile position | |
|---|
| salinity method | |
|---|
| sieving | |
|---|
| slope aspect | |
|---|
| soil type | Loessal Soil |
|---|
| slope gradient | |
|---|
| soil type method | |
|---|
| storage conditions | |
|---|
| texture | loam |
|---|
| texture method | |
|---|
| tillage | 2 |
|---|
| total N method | |
|---|
| total nitrogen | 0.82 g/kg |
|---|
| total organic carbon method | |
|---|
| total organic carbon | 12.2 g/kg |
|---|
| water content of soil | |
|---|
| water content of soil method | |
|---|
| sample volume or weight for DNA extraction | |
|---|
| Reference for biomaterial | |
|---|
| Relationship to oxygen | |
|---|
| Sample collection device or method | |
|---|
| Sample material processing | |
|---|
| Sample size | |
|---|
| source material identifiers | |
|---|
| Isolation source | |
|---|
| Custom Attributes | |
|---|
|
| Release date |
2021-01-08 |
| BioProject Accession |
PRJCA003344 |
| Submitter |
Sen Wang (wangsen1993@163.com)
|
| Organization |
Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences |
| Submission date |
2020-10-20 |
