| Accession |
SAMC072713 |
| Sample name |
CAS19-01 |
| Title |
Whole genome sequencing of African swine fever virus |
| Sample type |
Clinical or host-associated pathogen |
| Organism |
African swine fever virus |
| Description |
Next-generation sequencing and nanopore sequencing for an African swine fever virus. |
| Attributes |
|
Isolate
|
|
|
Strain
|
|
|
Collected by
|
Animal Centers for disease control and prevention of Guangdong Province
|
|
Collection date
|
2019-01-02
|
|
Geographic location
|
China:Zhuhai
|
|
Host
|
Sus scrofa
|
|
Host disease
|
African swine fever
|
|
Isolation source
|
spleen
|
|
Latitude and longitude
|
21.15 N 113.35 E
|
|
Culture collection
|
|
|
genotype
|
|
|
Host age
|
|
|
Host description
|
|
|
Host disease stage
|
|
|
Host health state
|
|
|
Host sex
|
not applicable
|
|
Host subject id
|
|
|
Host tissue sampled
|
|
|
Passage history
|
|
|
Pathotype
|
|
|
Serotype
|
|
|
Serovar
|
|
|
Specimen voucher
|
|
|
Subgroup
|
|
|
Subtype
|
|
|
| Release date |
2019-08-01 |
| BioProject Accession |
PRJCA001561 |
| Submitter |
Lijia Jia (jialj@wh.iov.cn)
|
| Organization |
Wuhan institute of virology |
| Submission date |
2019-07-07 |
