| Accession |
SAMC057769 |
| Sample name |
PK-01 |
| Title |
Whole genome sequencing and comparative genomic analysis of Staphylococcus haemolyticus from local hospital of Pakistan |
| Sample type |
Clinical or host-associated pathogen |
| Organism |
Staphylococcus haemolyticus |
| Description |
A strain of methicillin-resistant Staphylococcus haemolyticus was isolate from a patient admitted at CMH, Lahore, Pakistan. Whole genome was sequenced using illumina sequencing technology to get insight into the genomic diversity, pathogenicity and resistance profile. |
| Attributes |
|
Isolate
|
Homo sapiens
|
|
Strain
|
Staphylococcus haemolyticus Pk-01
|
|
Collected by
|
IBGR, National University of Sciences and Technology, Islamabad, Pakistan
|
|
Collection date
|
2018-03-16
|
|
Geographic location
|
Pakistan: Lahore
|
|
Host
|
Homo sapiens
|
|
Host disease
|
Wound Infection
|
|
Isolation source
|
Wound
|
|
Latitude and longitude
|
31.5204 N 74.3587 E
|
|
Culture collection
|
|
|
genotype
|
|
|
Host age
|
48 year(s)
|
|
Host description
|
|
|
Host disease stage
|
|
|
Host health state
|
|
|
Host sex
|
male
|
|
Host subject id
|
|
|
Host tissue sampled
|
|
|
Passage history
|
|
|
Pathotype
|
|
|
Serotype
|
|
|
Serovar
|
|
|
Specimen voucher
|
|
|
Subgroup
|
|
|
Subtype
|
|
|
| Release date |
2019-05-16 |
| BioProject Accession |
PRJCA000961 |
| Submitter |
Amjad Ali (amjad.ali@asab.nust.edu.pk)
|
| Organization |
Beijing Institute of Genomics, Chinese Academy of Sciences |
| Submission date |
2019-01-29 |
