Accession PRJCA002172
Title Rice microbiota
Relevance Agricultural
Data types Metagenome
Raw sequence reads
Organisms Bacteria
Description In this study, we collected samples from three major rice production provinces in China, for two harvest years. Our study aimed to, 1) characterize the taxonomic and functional profiles of the microbial communities of rice seeds and rhizosphere; 2) define the core microbiota of seed and rhizosphere samples from different geographical locations, and track the possible transmission paths (horizontal or vertical) of seed microbiota; 3) infer the significance of environmental and geographical factors shaping the microbial community.
Sample scope Environment
Release date 2020-01-28
Publication
PubMed ID Article title Journal name DOI Year
32754120 Microbiota in the Rhizosphere and Seed of Rice From China, With Reference to Their Transmission and Biogeography Frontiers in Microbiology 10.3389/fmicb.2020.00995 2020
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) 31725001
Submitter Xin    Zhou  (zhouxin5518@163.com)
Organization Institute of Microbiology, Chinese Academy of Sciences
Submission date 2020-01-28

Project Data

Resource name Description
BioSample (109)  show -
GSA (1) -
CRA002311 Rice microbiota