| Accession |
PRJCA001472 |
| Title |
Tree shrew long-read genome assembly |
| Relevance |
Model organism |
| Data types |
Whole genome sequencing
|
| Organisms |
Tupaia chinensis
|
| Description |
We applied the long-read single-molecule sequencing and high-through chromosome conformation capture (Hi-C) technology to obtain high-quality chromosome-scale scaffolding of the Chinese tree shrew genome. The new reference genome (TS_2.0) solved the problems in the available tree shrew genomes and enables us to get accurate identification of the large and complex repeat regions, gene structures and specie-specific genomic structural variants. |
| Sample scope |
Monoisolate |
| Release date |
2019-06-03 |
| Publication |
|
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| Chinese Academy of Sciences (CAS)
|
|
U1402224
|
National Natural Science Foundation of China
|
|
|
| Submitter |
Yu
Fan (fanyu@mail.kiz.ac.cn)
|
| Organization |
Kunming Institute of Zoology, Chinese Academy of Sciences |
| Submission date |
2019-05-30 |
