Accession PRJCA001390
Title Membrane-spanning protein genetic polymorphisms related to methotrexate therapeutic outcomes in a Chinese rheumatoid arthritis population
Relevance Medical
Data types Phenotype or Genotype
Variation
Organisms
Description Methotrexate (MTX) is a first-line disease-modifying antirheumatic drug (DMARD) for rheumatoid arthritis (RA), but individual variation in treatment response remains unexplained. The differences in drug efficacy and adverse drug reactions (ADRs) may be caused by genetic variations. We investigated the effect of single nucleotide polymorphisms (SNPs) in two genes encoding membrane-spanning proteins, namely, reduced folate carrier RFC/SLC (G>A (rs7499), A>G (rs2838956) and 180G>A (rs1051266)) and adenosine triphosphate binding cassette B1 (ABCB1, rs1045642). Tagged SNPs were genotyped in 162 patients with RA in China. Then, we analyzed the relationships between these SNPs and therapeutic outcomes related to MTX in Chinese RA patients. No significant association was found between the RFC/SLC (G>A (rs7499) and A>G (rs2838956)) and ABCB1 (rs1045642) gene polymorphisms and the response to MTX in RA patients. However, MTX-related toxicity was associated with one SNP, RFC rs1051266 AA vs GG (p=0.009, OR=6.523, 95% CI: 1.596, 26.565). SLC19A1 A>G rs2838956 showed a trend toward a significant association (p=0.085, OR=0.377, 95% CI: 0.124, 1.143) with toxicity. Our results suggest that the RFC 180G>A (rs1051266) SNP exerts a potentially protective effect against the risk of ADRs in Chinese RA patients treated with MTX. Further studies are required to validate these findings.
Sample scope Monoisolate
Release date 2019-04-23
Grants
Agency program Grant ID Grant title
Clinical Medical Science China-Japan Friendship Hospital 2014DFA31490
Submitter cheng    xiao  (xc2002812@126.com)
Organization Institute of Clinical Medical Science China-Japan Friendship Hospital
Submission date 2019-04-23

Project Data

Resource name Description