Accession PRJCA000538
Title Whole genome re-sequencing data of Arabidopsis thaliana mutants induced by carbon-ion beam
Relevance Agricultural
Data types Whole genome sequencing
Organisms Arabidopsis thaliana
Description Heavy-ion beam irradiation is one of the principal methods used to improve plant varieties. Research on mutagenic effects and molecular mechanisms of radiation is an important subject that is multi-disciplinary. However, it is impossible to fully characterize mutations induced by heavy-ion beam irradiation by results mainly focused on the phenotype, chromosome aberration, genetic polymorphism, or sequencing analysis of specific genes only. Here, we re-sequenced 11 mutagenesis progeny (M3) Arabidopsis lines derived from carbon-ion beam irradiation, and focused on substitutions and small insertion-deletion (INDELs). This revealed the molecular mutation spectrum and rate of carbon-ion beam irradiation on Arabidopsis at the genome wide level. This work can also inform theory and advances in radiation mutation breeding.
Sample scope Multiisolate
Release date 2017-10-27
Publication
PubMed ID Article title Journal name DOI Year
31850019 Genome-Wide Comparisons of Mutations Induced by Carbon-Ion Beam and Gamma-Rays Irradiation in Rice Resequencing Multiple Mutants Frontiers in Plant Science 10.3389/fpls.2019.01514 2019
29163581 Identification of Substitutions and Small Insertion-Deletions Induced by Carbon-Ion Beam Irradiation in Arabidopsis thaliana Frontiers in Plant Science 10.3389/fpls.2017.01851 2017
Submitter Yan    Du  (duyan@impcas.ac.cn)
Organization Institute of Modern Physics, Chinese Academy of Sciences
Submission date 2017-09-04

Project Data

Resource name Description
BioSample (12)  show -
GSA (1) -
CRA000464 IMP-C