WangS {QTL.gCIMapping.GUI} | R Documentation |
Genome-wide Composite Interval Mapping
WangS(flag,CriLOD,NUM,pheRaw,chrRaw_name,yygg,mx,phe,chr_name,gen, mapname,CLO)
flag |
fix or random model. |
CriLOD |
LOD score. |
NUM |
The number of trait. |
pheRaw |
Raw phenotype matrix. |
chrRaw_name |
raw chromosome name. |
yygg |
covariate matrix. |
mx |
raw genotype matrix. |
phe |
phenotype matrix. |
chr_name |
chromosome name. |
gen |
genotype matrix. |
mapname |
linkage map matrix. |
CLO |
Number of CPUs. |
Zhang Ya-Wen, Wen Yang-Jun, Wang Shi-Bo, Zhang Yuan-Ming
Maintainer: Yuanming Zhang<soyzhang@mail.hzau.edu.cn>
G1=data(gen) P1=data(phe) M1=data(map) W1re<-WangF(phe,gen,map,yygg1=NULL,flagRIL=0,cov_en=NULL,Population="DH",1,2.5) WangS(flag=1,CriLOD=2.5,NUM=1,pheRaw=phe,W1re$chrRaw_name,W1re$yygg, W1re$mx,W1re$phe,W1re$chr_name,W1re$gen,W1re$mapname,CLO=1)