Expression Database of Human Long non-coding RNAs
LncExpDB is a comprehensive database for lncRNA expression. It covers expression profiles
of lncRNA genes across various biological contexts,
predicts potential functional lncRNAs and their interacting partners, and thus provides essential
guidance on experimental design.
LncExpDB currently houses expression profiles of 101,293 high-quality human lncRNA genes
derived from 1,977 samples of 337 biological conditions
across nine biological contexts.
Consequently, LncExpDB estimates lncRNA genes’ expression reliability and
capacities, identifies 25,191 featured genes, and further obtains
28,443,865 lncRNA-mRNA interactions.
232 samples, 2 projects
7,498 featured genes
313 samples, 1 project
7,922 featured genes
125 samples, 2 projects
4,343 featured genes
297 samples, 1 project
1,232 featured genes
36 samples, 1 project
5,292 featured genes
97 saplmes, 2 projects
1,538 featured genes
658 samples, 1 project
2,907 featured genes
66 samples, 2 projects
985 featured genes
153 samples, 1 project
1,740 featured genes
LncBook: a curated knowledgebase of human long non-coding RNAs.
Nucleic Acids Res 2019. [PMID=30329098]
LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs.
Nucleic Acids Res 2015. [PMID=25399417]
Characterization and identification of long non-coding RNAs based on feature relationship.
Bioinformatics 2019. [PMID=30649200]
The UCSC Genome Browser database: 2018 update.
Nucleic Acids Res 2018. [PMID=29106570]
News and Update
08/14/2020 - version 1.0
Add reference gene model, expression profiles and co-expression matrix to Downloads page.
Last update: Aug 2020