Basic Information
SNP ID | tura2 |
---|---|
Organism | Triticum urartu |
Genome Assembly | IGDBv1 |
Version | 1 |
Variation Class | SNP |
Position | Tu1:51762 |
RefSNP Alleles | C/A |
Synonyms ID |
Gene Annotation
Gene ID | Transcript ID | Gene Symbol | Variant Effect | Biotype | cDNA Position | Allele Change | Protein ID | Protein Position | Residue Change |
---|---|---|---|---|---|---|---|---|---|
TuG1812G0100000001.01 | TuG1812G0100000001.01 | missense_variant | mRNA | 655 | Caa => Aaa | TuG1812G0100000001.01.P01 | 154 | Q => K | |
TuG1812G0100000003.01 | TuG1812G0100000003.01 | upstream_gene_variant | mRNA | - | - => - | TuG1812G0100000003.01.P01 | - | - => - | |
TuG1812G0100000002.01 | TuG1812G0100000002.01 | upstream_gene_variant | mRNA | - | - => - | TuG1812G0100000002.01.P01 | - | - => - |
Population Diversity
Population | Sample # | Allele:Frequency | Genotype:Frequency |
---|---|---|---|
Group I | 30 | A:0.4833; C:0.5167; | C|C:0.0333; C|A:0.9667; |
Group II | 64 | A:0.4609; C:0.5391; | C|C:0.0938; A|A:0.0156; C|A:0.8906; |
Group III | 53 | A:0.4717; C:0.5283; | C|C:0.0755; A|A:0.0189; C|A:0.9057; |