- GVM / Search / pop18
Basic Information
SNP ID |
pop18
|
Organism |
Populus trichocarpa |
Genome Assembly |
JGI v3.0 |
Version |
1
|
Variation Class |
SNP
|
Position |
chr1:1204 |
RefSNP Alleles |
A/G |
Synonyms ID |
|
Gene Annotation
Gene ID |
Transcript ID |
Gene Symbol |
Variant Effect |
Biotype |
cDNA Position |
Allele Change |
Protein ID |
Protein Position |
Residue Change |
Potri.001G000100
|
|
|
downstream_gene_variant |
mRNA |
0
|
-
=> -
|
Potri.001G000100.1 |
0
|
-
=> -
|
Potri.001G000200
|
|
POPTRDRAFT_750398 |
downstream_gene_variant |
mRNA |
0
|
-
=> -
|
Potri.001G000200.1 |
0
|
-
=> -
|
Population Diversity
Population |
Sample # |
Allele:Frequency |
Genotype:Frequency |
Populus |
298 |
A:0; G:0; |
NN:; |
Populus_deltoides |
574 |
A:0; G:0; |
NN:; |
Populus_nigra |
46 |
A:0.00; G:1.00; |
GG:1.00; |
Populus_simonii |
1 |
A:0; G:0; |
NN:; |