1. GVM / Search / osa5

Basic Information

SNP ID osa5
Organism Oryza sativa Japonica
Genome Assembly IRGSP1.0
Version 1
Variation Class SNP
Position chr1:1223
RefSNP Alleles G/C
Synonyms ID  

Gene Annotation

Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
Os01g0100100 Os01t0100100-01 - upstream_gene_variant mRNA 0 - => - Os01t0100100-01 0 - => -

Population Diversity

Population Sample # Allele:Frequency Genotype:Frequency
Indica 2567 G:1.00; C:0.00; GG:1.00;
japonica 1499 G:0.99; C:0.01; GG:0.99; CC:0.01;
Other 635 G:1.00; C:0.00; GG:1.00;
wild 451 G:1.00; C:0.00; GG:1.00;