1. GVM / Search / osa2

Basic Information

SNP ID osa2
Organism Oryza sativa Japonica
Genome Assembly IRGSP1.0
Version 1
Variation Class SNP
Position chr1:1162
RefSNP Alleles C/T
Synonyms ID  

Gene Annotation

Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
Os01g0100100 Os01t0100100-01 - upstream_gene_variant mRNA 0 - => - Os01t0100100-01 0 - => -

Population Diversity

Population Sample # Allele:Frequency Genotype:Frequency
Indica 2567 C:1.00; T:0.00; CC:1.00; TT:0.00;
japonica 1499 C:1.00; T:0.00; CC:1.00;
Other 635 C:1.00; T:0.00; CC:1.00;
wild 451 C:1.00; T:0.00; CC:1.00;