Basic Information
SNP ID | gmx8 |
---|---|
Organism | Glycine max |
Genome Assembly | Wm82.a2.v1 |
Version | 1 |
Variation Class | SNP |
Position | Chr01:82 |
RefSNP Alleles | A/C,T,G,* |
Synonyms ID |
Gene Annotation
Gene ID | Transcript ID | Gene Symbol | Variant Effect | Biotype | cDNA Position | Allele Change | Protein ID | Protein Position | Residue Change |
---|---|---|---|---|---|---|---|---|---|
intergenic_variant | - | - | - => - | - | - | - => - | |||
intergenic_variant | - | - | - => - | - | - | - => - | |||
intergenic_variant | - | - | - => - | - | - | - => - |
Population Diversity
Population | Sample # | Allele:Frequency | Genotype:Frequency |
---|---|---|---|
Glycine max | 8069 | A:0.9839; T:0.0009; C:0.0133; G:0.0004; *:0.; | A|T:0.0019; A|*:0.0029; A|G:0.0009; A|A:0.9677; A|C:0.0266; |
Glycine soja | 820 | A:0.9619; T:0.0142; C:0.0032; G:0.0206; | A|T:0.0284; A|G:0.0413; A|A:0.9239; A|C:0.0065; |
Glycine max x Glycine soja | 18 | A:0.9722; G:0.0278; | A|G:0.0556; A|A:0.9444; |
Glycine gracilis | 10 | A:1.0000; | A|A:1.0000; |