Basic Information
| SNP ID | chx54895210 |
|---|---|
| Organism | Capra hircus |
| Genome Assembly | CHIR_2.0 |
| Version | 1 |
| Variation Class | SNP |
| Position | chr14:48210965 |
| RefSNP Alleles | C/. |
| Synonyms ID |
Gene Annotation
| Gene ID | Transcript ID | Gene Symbol | Variant Effect | Biotype | cDNA Position | Allele Change | Protein ID | Protein Position | Residue Change |
|---|---|---|---|---|---|---|---|---|---|
| intergenic_variant | - | - | - => - | - | - | - => - |
Population Diversity
| Population | Sample # | Allele:Frequency | Genotype:Frequency |
|---|
G2P Annotation
| Breed/ Population | Sample Size | Tissue | Trait | Trait Ontology | Phenotype Type | Genotype Technology | Model | Reported Location | Effect Allele | P Value | OR | R2% | Reported Gene | Entrez Gene Symbol | QTL | PMID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Saanen, Toggenburg, and Alpine | 402 | teat | teat placement | mammary gland and milk production trait | quantitative | Genotyping by Array | Multi-Locus Mixed Model | CHIR_1.0:14_45453582 | 0.000016 | 102178462 | EYA1 | 29290434 |